Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20nalgiovense_20[genbank_20GCA_5F002072425.1_202017-03- 24] 1,956 sequences; 33,006,161 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq45 93.3 3e-14 >seq45 Length=198359 Score = 93.3 bits (102), Expect = 3e-14 Identities = 262/402 (65%), Gaps = 8/402 (2%) Strand=Plus/Minus Query 29989 ACGTAAAACTGACACATGGTGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGG 30048 ||||||||||| | | |||||||| || || ||||| || || |||| Sbjct 126410 ACGTAAAACTGGGCGAACATATGGCACGGGGGCAGGGCCATCTTTTTCAGATCAGCGGGG 126351 Query 30049 TTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACGGCG 30108 ||||| |||| || ||||||||| | || |||||| | ||| || ||| | Sbjct 126350 TTCCACGCGCTCATGATGATGCGGCGATCGAATGGGTTATGAATGAGCTTGTGCACAACA 126291 Query 30109 TTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTCTGCT 30168 | || ||||| || || ||| || ||||| || | | | ||| ||||| || Sbjct 126290 TCTTTGAGCTGGTCGACACCCTGGCCGGAGTAATCCGTCTTGGCGTCGACATACTCGGCG 126231 Query 30169 CCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCG 30228 || || |||| ||||||||| || ||||| ||||| || || || ||||| | ||| || Sbjct 126230 CCAAAGTGCCGCCACTGGAATCCATACACGGGTCCTAGATCGCCTTCTTCGCGGTGGCCG 126171 Query 30229 AAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTC 30288 | ||| || |||| ||| || | | || || | ||||| ||||| | ||| Sbjct 126170 AGGCCGGATTTATCCAGAAACTCGCGGCTTCCATTTCCATCCCAAATCTTAATCCCGGCT 126111 Query 30289 TCGGAGAGCTCTTTGGAGTTT----GTGGACCCTCTGACGAACCACAGCAGCTCCTCCAC 30344 |||||||| | |||| ||| | || || |||||| || || || | | Sbjct 126110 TCGGAGAG----TGGGAGCGACGAGGTGCAGCCAGAGATGAACCAGAGTAGTTCGGCGAG 126055 Query 30345 GACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGGAAA 30386 ||||| | |||||| | ||| || ||||||||||| || Sbjct 126054 CACGGCGCGCAGAAAGACTCGCTTCGTGGTGAGGAGGGGCAA 126013 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408607859067188