Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20nalgiovense_20[genbank_20GCA_5F002072425.1_202017-03- 24] 1,956 sequences; 33,006,161 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq18 104 2e-17 >seq18 Length=433890 Score = 104 bits (114), Expect = 2e-17 Identities = 162/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| | || || | ||||| || ||||| ||||| || || || | | Sbjct 305498 ATGCAGATCTTTGTCAAGACTTTGACCGGAAAGACTATCACGCTAGAGGTTGAGAGCTCA 305439 Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || |||| ||| | || |||||| ||||| || || || || || || || Sbjct 305438 GACACCATCGACAACGTTAAGAGCAA-GATCCAGGACAAGGAGGGTATTCCCCCTGACCA 305380 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || ||| | ||||| || || || ||||||||||| | | | | || || || || Sbjct 305379 GCAGCGTCTTATCTTCGCTGGTAAGCAGCTGGAGGACGGGCGTACTCTTTCGGACTACAA 305320 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 ||| || ||||| || || ||| |||||||||| |||| || ||| Sbjct 305319 CATCCAGAAGGAGAGCACCCTGCACCTGGTGTTGCGTCTGCGTGGCGGC 305271 Score = 104 bits (114), Expect = 2e-17 Identities = 136/186 (73%), Gaps = 2/186 (1%) Strand=Plus/Minus Query 24728 ACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGA-AACGGTAAAACA 24786 ||||| || || || || ||||| || || | | ||||| | || |||| ||| | Sbjct 305930 ACCGGAAAGACCATCACTCTCGAGGTTGAGTCATCTGACACCATCGACAACGTTAAGTCC 305871 Query 24787 AAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAA 24846 || |||||| ||||| || || || || ||||| || |||||| | ||||||||||| || Sbjct 305870 AA-GATCCAGGACAAGGAGGGCATTCCCCCCGACCAGCAACGTCTTATCTTTGCCGGCAA 305812 Query 24847 ACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACA 24906 ||| |||||||| | | |||| || || ||||| || ||||| || || ||||| Sbjct 305811 GCAGTTGGAGGATGGTCGTACTCTGTCCGACTACAACATCCAGAAGGAGTCCACTCTACA 305752 Query 24907 CTTGGT 24912 |||||| Sbjct 305751 CTTGGT 305746 Score = 102 bits (112), Expect = 7e-17 Identities = 145/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| || | || ||||| || || || |||||||| || || || || | || Sbjct 305726 ATGCAGATTTTCGTCAAGACGCTCACTGGCAAGACTATTACACTTGAGGTCGAGTCATCC 305667 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || ||||||||||| || || || || || ||||| ||| Sbjct 305666 GACACCATCGATAATGTGAAGTCCAAGATCCAAGATAAGGAGGGCATTCCCCCCGACCAA 305607 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| | ||||| || || || ||||| |||||| | | | || || || ||| Sbjct 305606 CAGCGTCTTATCTTCGCAGGCAAGCAGCTTGAGGATGGCCGTACACTCTCCGACTACAAC 305547 Query 24884 ATTCAAAAGGAATCGACACTACAC 24907 ||||| |||||||| || || ||| Sbjct 305546 ATTCAGAAGGAATCCACCCTCCAC 305523 Score = 95.1 bits (104), Expect = 1e-14 Identities = 96/125 (77%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 24788 AAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAA 24847 |||||||| ||||| || || || ||||| || ||||| ||||||||||| ||||| || Sbjct 306156 AAGATCCAGGACAAGGAGGGCATCCCTCCTGACCAACAGCGTTTGATCTTCGCCGGCAAG 306097 Query 24848 CAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACAC 24907 ||||| |||||| | | | || || |||||||| || ||||| || || || ||| Sbjct 306096 CAGCTCGAGGATGGCCGCACTCTTTCCGACTATAACATCCAGAAGGAGTCTACTCTTCAC 306037 Query 24908 TTGGT 24912 ||||| Sbjct 306036 TTGGT 306032 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449886600003680