Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20nalgiovense_20[genbank_20GCA_5F002072425.1_202017-03- 24] 1,956 sequences; 33,006,161 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq18 158 3e-33 seq3 104 6e-17 seq20 98.7 2e-15 seq151 87.8 4e-12 >seq18 Length=433890 Score = 158 bits (174), Expect = 3e-33 Identities = 168/222 (76%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| | |||||||||||||| |||||||| || || | ||||| |||| | || Sbjct 305505 ACGAAGGCGGAGGACAAGGTGGAGGGTGGATTCCTTCTGAATGTTGTAGTCGGAGAGTGT 305564 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | ||||| || |||||||| || ||||||||||| || ||||||||||| ||||| || Sbjct 305565 ACGGCCATCCTCAAGCTGCTTGCCTGCGAAGATAAGACGCTGTTGGTCGGGGGGAATGCC 305624 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 ||||| ||||||||||| ||||||| ||||||||||| || | || || || | Sbjct 305625 CTCCTTATCTTGGATCTTGGACTTCACATTATCGATGGTGTCGGATGACTCGACCTCAAG 305684 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || || |||||||| || | || || | ||| | ||||| Sbjct 305685 TGTAATAGTCTTGCCAGTGAGCGTCTTGACGAAAATCTGCAT 305726 Score = 149 bits (164), Expect = 1e-30 Identities = 157/207 (76%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||| || | || || ||||| || ||| || || |||| ||||| || | | ||| Sbjct 305277 ACGCAGACGCAACACCAGGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCCGAAAGAGT 305336 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | ||| || || |||||||| |||||||||||||| || || ||||| || |||||||| Sbjct 305337 ACGCCCGTCCTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCAGGGGGAATACC 305396 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 |||||||| |||||||| ||| || ||||||||||||||| | || || |||| Sbjct 305397 CTCCTTGTCCTGGATCTTGCTCTTAACGTTGTCGATGGTGTCTGAGCTCTCAACCTCTAG 305456 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTT 225698 |||||| ||||| || |||||||| || Sbjct 305457 CGTGATAGTCTTTCCGGTCAAAGTCTT 305483 Score = 134 bits (148), Expect = 3e-26 Identities = 148/197 (75%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || | ||| |||||||| || || |||| ||||| |||| || ||| | ||||| Sbjct 305743 AGAACCAAGTGTAGAGTGGACTCCTTCTGGATGTTGTAGTCGGACAGAGTACGACCATCC 305802 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || | |||||| || || |||||||| ||||| |||||||| ||||| || |||||||| Sbjct 305803 TCCAACTGCTTGCCGGCAAAGATAAGACGTTGCTGGTCGGGGGGAATGCCCTCCTTGTCC 305862 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||| || ||||||||||| || | || || || | ||||| ||| Sbjct 305863 TGGATCTTGGACTTAACGTTGTCGATGGTGTCAGATGACTCAACCTCGAGAGTGATGGTC 305922 Query 225682 TTGCCCGTCAAAGTTTT 225698 || || ||||| || || Sbjct 305923 TTTCCGGTCAAGGTCTT 305939 >seq3 Length=1011523 Score = 104 bits (114), Expect = 6e-17 Identities = 95/120 (79%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| ||||| ||||| || || || |||| ||||| || | | ||| | ||||| Sbjct 590649 AGGACGAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTGCGGCCATCC 590590 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| ||||||||||| || || ||||||||||| || ||||| ||||||||| Sbjct 590589 TCGAGCTGCTTACCAGCGAAGATCAGGCGCTGTTGGTCGGGGGGGATACCCTCCTTGTCT 590530 >seq20 Length=416849 Score = 98.7 bits (108), Expect = 2e-15 Identities = 129/179 (72%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 225526 TTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATA 225585 || |||| ||||| ||| || || | ||||| || |||||||| || |||||||| Sbjct 354172 TTCTGGATGTTGTAGTCGCTCAGGGTACGGCCATCCTCGAGCTGCTTGCCGGCGAAGATC 354231 Query 225586 AGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCG 225645 || || |||||||| || ||||| || |||||||| |||||||| ||| || ||| Sbjct 354232 AGGCGCTGTTGGTCAGGGGGAATGCCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGTCG 354291 Query 225646 ATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTTTTTATGAA 225704 |||||||| | || || || | || || ||||| ||||||| || || | ||| Sbjct 354292 ATGGTGTCGCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 354350 >seq151 Length=19435 Score = 87.8 bits (96), Expect = 4e-12 Identities = 81/101 (80%), Gaps = 4/101 (4%) Strand=Plus/Minus Query 370672 TTCAGGATGACCAAAAAATCAGAATAAATGTTG--ATAAAGGATAGGATCGCCTCCGCCT 370729 |||||| || ||||| ||||||||||||||||| ||||| |||||||| || || || Sbjct 3704 TTCAGGGTGTCCAAAGAATCAGAATAAATGTTGGAATAAA--ATAGGATCACCACCACCA 3647 Query 370730 GATGGATCAAAAAAGCTAGTATTAAAATTTCTATCAGTTAA 370770 | | ||||| || ||||||||| |||||||||||||| Sbjct 3646 GCTACTTCAAAGAATGAAGTATTAAAGTTTCTATCAGTTAA 3606 Score = 84.2 bits (92), Expect = 5e-11 Identities = 197/293 (67%), Gaps = 7/293 (2%) Strand=Plus/Plus Query 7441 ACGTTATATTTAATATTTGGTGGCTTTTCTGGTATTATAGGTACTATATTTTCTATGATT 7500 || ||||| ||||| |||| ||||| ||| | | || || |||||| | | Sbjct 3024 ACTTTATACTTAATGTTTGCATTATTTTCAGGTTTAGTTGGAACAGCATTTTCAGTTTTA 3083 Query 7501 ATAAGGTTAGAATTAGCTGCTCCGGGTTCTCAA-ATAT-TGAGTGGTAATAGCCAACTTT 7558 || || ||||||||| ||| ||| || ||| |||| | || |||| ||| | | Sbjct 3084 ATTAGATTAGAATTATCTGGTCCAGGAGTACAATATATATCAGA--TAAT---CAATTAT 3138 Query 7559 ACAACGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATGCCGGTTA 7618 | || ||| || || || || || | | |||||||||||| | |||||||| | Sbjct 3139 ATAATAGTATAATAACAGCACACGCTATATTAATGATTTTCTTTATGGTTATGCCTGCAT 3198 Query 7619 TGATAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGATATGGCTT 7678 | || || ||||| || |||| || | || ||| | | || | ||| |||||||| | Sbjct 3199 TAATTGGAGGTTTTGGTAATTTCTTATTACCATTATTAGTAGGAGGTCCAGATATGGCAT 3258 Query 7679 TTCCAAGGCTTAACAATATAAGTTTTTGATTACTACCGCCTTCCTTATTTCTA 7731 | || || | || ||||| |||||||||||| || ||| |||||| || Sbjct 3259 TCCCTAGATTAAATAATATTAGTTTTTGATTATTAGTTCCTAGTTTATTTTTA 3311 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192501313677464