Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20nordicum_20[genbank_20GCA_5F000733025.2_202015-07-10] 915 sequences; 30,421,340 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq114 111 2e-19 seq20 104 3e-17 >seq114 Length=94865 Score = 111 bits (122), Expect = 2e-19 Identities = 117/154 (76%), Gaps = 0/154 (0%) Strand=Plus/Plus Query 24126 AACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAA 24185 |||| || ||| ||||| || ||| |||||||| || | | || | |||||||| Sbjct 8074 AACAGCAGACAAGCGAAGTCAGTGTGGAGACCCTCATCACGAGAGATCAGCTCGTTGGAG 8133 Query 24186 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCA 24245 || ||||| || ||||| ||||||||||| || ||||| || ||||| || ||||| ||| Sbjct 8134 AAAGTGAGACCAGGCATCAGGCCACGCTTCTTGAGCCAGAAGATGGAGGCGAATGAGCCA 8193 Query 24246 GAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAA 24279 || ||||| || || || || || || ||||||| Sbjct 8194 GAGAAGAAGATACCCTCGACAGCGGCGAAGGCAA 8227 >seq20 Length=214888 Score = 104 bits (114), Expect = 3e-17 Identities = 530/841 (63%), Gaps = 12/841 (1%) Strand=Plus/Plus Query 54010 CCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAA 54069 ||| || |||| ||| || || ||||| |||||||| || |||| | ||| || Sbjct 63307 CCAGTCACCGTTGGCCTCAACACGCTTCATGAAGAGATCGGGGGTCCACAAAGCGTAGAA 63366 Query 54070 TAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCAT 54129 || || | | | | ||||| || || ||||| |||||||||||| | | Sbjct 63367 GAGGTCACGAGCGCGAACCTCCTCCTTACCGTGGTTCTTCCGCAGATCGAGGAACTCGAA 63426 Query 54130 AATATCAGAATGCCACGGTTCCAAGTATATGGTCATAACTCCAGGCCGTTTGTTTCCTCC 54189 | ||| | |||||||| |||| ||| |||| | | ||||| || ||||| || || Sbjct 63427 GACATCGGCGTGCCACGGCTCCAGGTAGATGGCAAATGCACCAGGGCGCTTGTTACCACC 63486 Query 54190 CTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGA 54249 ||| || | || | || ||||| ||| | || | || ||| |||| |||||| ||||| Sbjct 63487 CTGGTCGACATAGCGTGCAGTGTTGTTAAACACACGCAGCATAGGAACAATACCGTTGGA 63546 Query 54250 TGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATA--TTACTAATTGATAGA 54307 | || ||||| || || || || | || |||||| | ||| ||| Sbjct 63547 GGAGCCGTTGGTTCCACCAATGTAAGAACCGGTAGCGCGAATACGGTGGACATT--CAGA 63604 Query 54308 CCTATCCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCC 54367 || || || || || | || ||||| | || ||| || | ||||| ||||| ||| Sbjct 63605 CCGATACCACCAGCGGTCTTGGAGATCATGGCACATGTCTTGAGAGTATCGTAGATACCC 63664 Query 54368 TCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTT 54427 || || || ||| | ||| | | || || || | | ||| | | ||| Sbjct 63665 TCAATGCTGTCAGCGCTCACATCGACCAGGAAGCAAGATGCAAGCTGGGGCTGGGGAGTA 63724 Query 54428 CCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTAC 54487 | ||||| || | || ||||| ||||| || || | || | || | | | ||| Sbjct 63725 GCGGCATTGAACAGAGTGGGAGAGGCGTGGGTGAAGTACTTCTGGGACATCAAGTGGTAT 63784 Query 54488 GTCTCGATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATG 54547 ||||| || || || |||||| || ||||| || || |||||||| | || | Sbjct 63785 GTCTCAATGGCCCTCTCGATATCCTCGCCGTGGATTCCGACAGCAACACGCATCAGCAAG 63844 Query 54548 TGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAGCAAGTAGGATTTTTCCAAAGTT 54607 |||||||| | ||| | | ||| ||| || || | ||| || || | || Sbjct 63845 TGCTGAGGACGCTCAGCAACATTGCCGTTAATGCGAAGAAGGTATGAACGCTCGAGGGTC 63904 Query 54608 TTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACTGAGTTGAGTTTA 54667 || || || || ||||||| ||||| || ||||| | ||| | |||||||| Sbjct 63905 TTGAATCCGAAGAAGTTGTAGTTGAAGTCACGGTCGTACACAATGGCCGAGTTGAG---C 63961 Query 54668 TCCTTATATTTGTTAACTACATCCATGGTAAT----ACTTGAAATAATCGGAGAATGTTT 54723 |||| | || | |||| | | ||||| |||| || || |||| | | || Sbjct 63962 TCCTCGGCGTGCTTCATTACAATC-TCGTAATGTTCCTTTGAGATCATAGGAGCAGGCTT 64020 Query 54724 CCCATTTTTAGGATTGACATAGTTAAATAAATCCTTCATCACTTCACTAAATAGtttttt 54783 ||||| || || || |||| | | ||| || || | ||| | ||||| Sbjct 64021 ATTGTTTTTGGGGTTCACGTAGTGGTACAGATCGGAGATGACCATAGAGAATTGCTTTTT 64080 Query 54784 tGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAATGGCATAATCCGGATG 54843 |||| ||||| || || || ||||| || | || || |||||||| || || || || Sbjct 64081 AGTTTGCTTGTGGAGGTTCGAAACGGCGATACGTGCAGCCAGAATGGCGTAGTCGGGGTG 64140 Query 54844 T 54844 | Sbjct 64141 T 64141 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593714809309200