Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20nordicum_20[genbank_20GCA_5F000733025.2_202015-07-10]
915 sequences; 30,421,340 total letters
Query= NC_002169.1
Length=135611
Score E
Sequences producing significant alignments: (Bits) Value
seq13 120 3e-22
seq36 105 6e-18
seq37 84.2 2e-11
>seq13
Length=236366
Score = 120 bits (132), Expect = 3e-22
Identities = 138/182 (76%), Gaps = 4/182 (2%)
Strand=Plus/Plus
Query 118551 TTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATG 118610
|| || |||||||| ||||||| ||||| |||||||||||| ||||| ||| ||||
Sbjct 24844 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGATC 24903
Query 118611 AGACGCTGCTGATCGGGAGGTATGCCCTCCTTGT-CTGTAATTTTTTGT-TTAACCTGTT 118668
||||||||||| ||||| || ||||||||||||| ||| | | || || || || | |
Sbjct 24904 AGACGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGA--TCTTGGTCTTGACGTTGT 24961
Query 118669 CGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAA 118728
||| |||||| | |||||| |||| ||| | || || || ||||| || || || |
Sbjct 24962 CGATGGTGTCGCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGA 25021
Query 118729 AA 118730
||
Sbjct 25022 AA 25023
>seq36
Length=176580
Score = 105 bits (116), Expect = 6e-18
Identities = 151/213 (71%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 118526 CAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATC 118585
|||||||| ||||| || ||||| || || |||||||| || | ||| || ||
Sbjct 98596 CAACACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTACGTCCGTC 98537
Query 118586 CTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645
||| ||||| || |||||| |||| || |||||||| || ||||| || |||||||||||
Sbjct 98536 CTCCAGCTGCTTACCAGCGAAGATAAGGCGCTGCTGGTCAGGAGGAATACCCTCCTTGTC 98477
Query 118646 TGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGT 118705
|| || || || | |||| ||||| | |||||| || | || | ||
Sbjct 98476 CTGGATCTTGCTCTTGACATTATCGATAGTGTCGGATGACTCGACTTCAAGTGTAATAGT 98417
Query 118706 TTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
||||| || || || || || |||||||||||
Sbjct 98416 CTTGCCAGTGAGCGTCTTCACGAAAATCTGCAT 98384
Score = 100 bits (110), Expect = 2e-16
Identities = 130/180 (72%), Gaps = 0/180 (0%)
Strand=Plus/Minus
Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594
||||| || ||||| |||||||||||||| || | ||| || ||||| |||||
Sbjct 98359 GTGGAGGGTGGACTCCTTTTGAATGTTGTAGTCCGAAAGAGTACGTCCGTCCTCAAGCTG 98300
Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTT 118654
|| || ||| |||||||||||||||| ||||| || ||||||||||| || || ||
Sbjct 98299 CTTGCCTGCGAAGATGAGACGCTGCTGGTCGGGGGGGATGCCCTCCTTATCCTGGATCTT 98240
Query 118655 TTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGT 118714
||||| | |||| || || || ||||||||| | ||| | || ||||| ||
Sbjct 98239 CGACTTAACGTTGTCGATAGTATCGCTGGACTCGACCTCAAGGGTGATGGTCTTGCCAGT 98180
>seq37
Length=176155
Score = 84.2 bits (92), Expect = 2e-11
Identities = 82/106 (77%), Gaps = 0/106 (0%)
Strand=Plus/Plus
Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601
|| ||||| || || ||||||||||| | |||||| ||||||||||| || ||
Sbjct 92826 GTCGACTCCTTCTGGATGTTGTAATCCGAAAGAGTGCGGCCGTCCTCGAGCTGCTTGCCG 92885
Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTG 118647
||| |||| || |||||||| || || || || |||||||||||||
Sbjct 92886 GCGAAGATCAGGCGCTGCTGGTCAGGGGGAATACCCTCCTTGTCTG 92931
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433825562113180
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |