Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20nordicum_20[genbank_20GCA_5F000733025.2_202015-07-10] 915 sequences; 30,421,340 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq20 279 5e-70 seq114 122 8e-23 seq36 95.1 1e-14 seq13 86.0 6e-12 >seq20 Length=214888 Score = 279 bits (308), Expect = 5e-70 Identities = 645/963 (67%), Gaps = 12/963 (1%) Strand=Plus/Plus Query 23020 GGCGATCGAGGCAAGATTGCATACGGCCACCTCGTCTTTGGACGTGTACTCTACAATTTC 23079 ||||| || || || ||||| || |||||||| || || ||||||| ||||| || Sbjct 63001 GGCGAGAGAAGCCAGGTTGCAGACAGCCACCTCATCAGGGGCACTGTACTCGACAATCTC 63060 Query 23080 GGTACATAGATTG---CTACACTTTATCGTGCCCAAATTGCTCTGGTTGCTTTTTCGATT 23136 || || || ||| |||| || || |||| || ||||||| || || || Sbjct 63061 AGTGCACAGGTTGGAGCTACGA---ATAGTACCCAGGTTCTTCTGGTTACTCTTCTTGTT 63117 Query 23137 GCACGAATCCTTGTAGAGCATGTACGGCGTGCCCGTCTCGACCTGCGACTCGATGATCGC 23196 ||| | ||||||||||||||| | || | || ||||| ||| | ||| | || || Sbjct 63118 GCAAGCATCCTTGTAGAGCATAAAGGGGTTACCAGTCTCAGTCTGGGCCTCAAGAATGGC 63177 Query 23197 TCGCCACATAGTCTGAGCGTGAACACGTCGCACGTAC-CTGCCTTCTTCCTCGTACTTTT 23255 ||| | ||||||| | | ||| || | | |||||| | ||||||||| Sbjct 63178 GTACCAGAGCTTCTGAGCCTTGATG-GTCTTGCGGCCACGGCCTTCCTGCTCGTACTTCG 63236 Query 23256 GGTACAACGCGTCAAATTCGGCACCGTA-ACAGTCGGCCAGGCCGGGCGATTGCATCGGA 23314 ||| | || || || || | ||||| ||| || ||||| ||||| | | | || Sbjct 63237 CGTAGAGAGCATCGAACTCATCGCCGTAGACA-TCAGCCAGACCGGGGGCCTCGTTGGGG 63295 Query 23315 CACATGAGACTCCACATTGAGTCATTTTCAACGCGTCTCATAAAAAGATCCGGTATCCAT 23374 || | ||| |||| || ||||| || |||| || ||||| || |||| Sbjct 63296 CAGAAGAGGGTCCAGTCACCGTTGGCCTCAACACGCTTCATGAAGAGATCGGGGGTCCAC 63355 Query 23375 AGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCC 23434 | ||||||||| || || || ||||| |||||||| || ||| |||||| || ||| Sbjct 63356 AAAGCGTAGAAGAGGTCACGAGCGCGAACCTCCTCCTTACCGTGGTTCTTCCGCAGATCG 63415 Query 23435 AAAAAGTCCAACACGTCCGCATGCCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTC 23494 | || || || || || || ||||||||||| ||||| | |||||| || || || | | Sbjct 63416 AGGAACTCGAAGACATCGGCGTGCCACGGCTCCAGGTAGATGGCAAATGCACCAGGGCGC 63475 Query 23495 TTATTGCCGCCCTGATCGACGTAACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACG 23554 || || || ||||| ||||| || || || |||||||| |||| | ||||| || || Sbjct 63476 TTGTTACCACCCTGGTCGACATAGCGTGCAGTGTTGTTAAACACACGCAGCATAGGAACA 63535 Query 23555 AGACCGTTGGACGCGCCGCCTACGCCCGCCACACT-CGAACCTTTTGCTCGAACGTTGTG 23613 | ||||||||| | |||| | || ||| | ||||| | || |||| ||| Sbjct 63536 ATACCGTTGGAGGAGCCG-TTGGTTCCACCAATGTAAGAACCGGTAGCGCGAATACGGTG 63594 Query 23614 AACGTGGAAACCTATGCCTCCGCCCGATTTCGATATCATCGCGCATTGTTTCAGAGTGTC 23673 || | | ||| || || || | | || || ||||| || ||| || ||||| || Sbjct 63595 GACATTCAGACCGATACCACCAGCGGTCTTGGAGATCATGGCACATGTCTTGAGAGTATC 63654 Query 23674 GTAGATGCCCTCGATGCTGTCCTCTTTGGTCGCGACCAAGAAACACGAAGACATTTGCGC 23733 |||||| ||||| |||||||| | | |||||| ||| || || | | || | Sbjct 63655 GTAGATACCCTCAATGCTGTCAGCGCTCACATCGACCAGGAAGCAAGATGCAAGCTGGGG 63714 Query 23734 TTTGGGCGTAGCGGCCGAGAACAGTGTCGGGCTGGCGTGCGTAAAGTATCCATTCGACAT 23793 | ||| |||||||| |||||| || || |||||| || ||||| | ||||| Sbjct 63715 CTGGGGAGTAGCGGCATTGAACAGAGTGGGAGAGGCGTGGGTGAAGTACTTCTGGGACAT 63774 Query 23794 TAGATTGTACGTGTCGATGGCGGCATCAATGTCCTCTCCGTGTATACCGATGGCGACGCG 23853 | | ||| || || ||||| || || ||||| ||||| || |||| || || || Sbjct 63775 CAAGTGGTATGTCTCAATGGCCCTCTCGATATCCTCGCCGTGGATTCCGACAGCAACACG 63834 Query 23854 CATCATCATGTATTGAGGTCTCTCGACCGTGACGCCGTTAATTTTGAACAGATATGAACG 23913 ||||| || || ||||| | ||| | ||||||||| | || |||||||| Sbjct 63835 CATCAGCAAGTGCTGAGGACGCTCAGCAACATTGCCGTTAATGCGAAGAAGGTATGAACG 63894 Query 23914 TTGCATCGTTTTAAATCCAAAATAGTCATAGTTAAAGTCACGATCGTGCACTATGGCCGA 23973 | | || || ||||| || ||| ||||| |||||||| |||| ||| |||||||| Sbjct 63895 CTCGAGGGTCTTGAATCCGAAGAAGTTGTAGTTGAAGTCACGGTCGTACACAATGGCCGA 63954 Query 23974 ATT 23976 || Sbjct 63955 GTT 63957 >seq114 Length=94865 Score = 122 bits (134), Expect = 8e-23 Identities = 169/234 (72%), Gaps = 2/234 (1%) Strand=Plus/Minus Query 57909 ATCGCCAAGAAGGCAGAGTGGTCAATCAAATGGATAAAA-AGCGCCACGGCCACGTTCGC 57967 || ||||||||||| | ||| | |||| ||||| || | ||| | | | || ||||| Sbjct 8297 ATTGCCAAGAAGGCCAACTGGGCCCTCAAGTGGATCAACGACCGCGA-GTCAACCTTCGC 8239 Query 57968 CGAGAGGCTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGC 58027 | | || | || |||||||| ||||| ||||| ||||| || ||| || || | Sbjct 8238 TTCGCGTCTGGTTGCCTTCGCCGCTGTCGAGGGTATCTTCTTCTCTGGCTCATTCGCCTC 8179 Query 58028 AATATTTTGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGAT 58087 || || ||| | ||||| || ||||||||||| || || || || ||||||| |||| Sbjct 8178 CATCTTCTGGCTCAAGAAGCGTGGCCTGATGCCTGGTCTCACTTTCTCCAACGAGCTGAT 8119 Query 58088 ATCGCGCGACGAGGGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACAT 58141 || || || ||||||||||| ||||| || || || || ||| ||| ||||| Sbjct 8118 CTCTCGTGATGAGGGTCTCCACACTGACTTCGCTTGTCTGCTGTTCTCCCACAT 8065 >seq36 Length=176580 Score = 95.1 bits (104), Expect = 1e-14 Identities = 150/212 (71%), Gaps = 6/212 (3%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| |||||||| ||||| || || ||||| || || || | || || || | ||| Sbjct 98384 ATGCAGATTTTCGTGAAGACGCTCACTGGCAAGACTATTACACTTGAAGTCGAGTCATCC 98443 Query 31253 GACAGTGTCGAAACGGTCAAACAGAG-AATAGC--GGACAAGGAAGGCGTGCCGCCCGAC 31309 |||| | |||| | ||||| ||| || | | ||||||||| || | || || ||| Sbjct 98444 GACACTATCGATAATGTCAA---GAGCAAGATCCAGGACAAGGAGGGTATTCCTCCTGAC 98500 Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTAT 31369 |||||||| || || |||||||| || ||| |||| ||| ||| | || || Sbjct 98501 CAGCAGCGCCTTATCTTCGCTGGTAAGCAGCTGGAGGACGGACGTACTCTTTCGGACTAC 98560 Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGT 31401 ||||| || || || || ||||| || ||||| Sbjct 98561 AACATCCAGAAGGAGTCCACTCTCCACCTGGT 98592 >seq13 Length=236366 Score = 86.0 bits (94), Expect = 6e-12 Identities = 129/181 (71%), Gaps = 2/181 (1%) Strand=Plus/Minus Query 31201 TTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGT 31260 |||||| ||||| ||||| || || || || ||| |||| || || || ||||| | Sbjct 25023 TTTCGTCAAGACCCTGACGGGTAAGACCATTACCCTCGATGTCGAGTCGAGCGACACCAT 24964 Query 31261 CGAAACGGTCAA-ACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTC 31319 ||| | ||||| || ||| | ||||||||| ||| | || |||||||||||||||| Sbjct 24963 CGACAACGTCAAGACCAAGA-TCCAGGACAAGGAGGGCATCCCCCCCGACCAGCAGCGTC 24905 Query 31320 TAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAA 31379 | || ||||| || || ||| | || || || ||||||| || ||||| || | Sbjct 24904 TGATCTTCGCCGGAAAGCAGCTCGAGGATGGCCGCACCCTGAGCGACTACAACATCCAGA 24845 Query 31380 A 31380 | Sbjct 24844 A 24844 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445761301546800