Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20nordicum_20[genbank_20GCA_5F000733025.2_202015-07-10]
915 sequences; 30,421,340 total letters
Query= NC_003310.1
Length=196858
Score E
Sequences producing significant alignments: (Bits) Value
seq20 127 3e-24
seq114 111 2e-19
>seq20
Length=214888
Score = 127 bits (140), Expect = 3e-24
Identities = 725/1149 (63%), Gaps = 28/1149 (2%)
Strand=Plus/Plus
Query 62948 AGATGCCAGATTACACACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCA 63007
||| ||||| || || || || ||||||| || | || | | |||||||||||
Sbjct 63007 AGAAGCCAGGTTGCAGACAGCCACCTCATCAGGGGCACTGTACTCGACAATCTCAGTGCA 63066
Query 63008 AAGATTA---CTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGC 63064
|| || |||| ||||| || | || | || |||||||| ||||| || ||
Sbjct 63067 CAGGTTGGAGCTACGA---ATAGTACCCAGGTTCTTCTGGTTACTCTTCTTGTTGCAAGC 63123
Query 63065 ATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCA 63124
|||||| || || || || || ||||||| ||| |||| | || | ||| || | |||
Sbjct 63124 ATCCTTGTAGAGCATAAAGGGGTTACCAGTCTCAGTCTGGGCCTCAAGAATGGCGTACCA 63183
Query 63125 GACGACTC-GAGCCTTTATTATAGATTTGTATCT----CCTTTCTCTTTCGTA--TAGAG 63177
|| | || ||||||| || | ||| | |||| || | |||| | | |
Sbjct 63184 GA-GCTTCTGAGCCTTGATGGTC---TTGCGGCCACGGCCTTCCTGCT-CGTACTTCGCG 63238
Query 63178 TATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCTAGGACATTCATCCGGAC 63237
|| | | |||||||| || || | |||| ||| | || || | || |
Sbjct 63239 TAGAGAGCA--TCGAACTCATCGCCGTAGACATCAGCCAGACCGGGGGCCTCGTTGGGGC 63296
Query 63238 ACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAA 63297
| | | | ||| || |||| ||| || || ||||| |||||||| || |||| |
Sbjct 63297 AGAAGAGGGTCCAGTCACCGTTGGCCTCAACACGCTTCATGAAGAGATCGGGGGTCCACA 63356
Query 63298 GAGCTATAAATAGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGA 63357
||| || || || | | | | ||||| || || ||||| |||||||
Sbjct 63357 AAGCGTAGAAGAGGTCACGAGCGCGAACCTCCTCCTTACCGTGGTTCTTCCGCAGATCGA 63416
Query 63358 GGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTT 63417
||||| | | | ||| | |||||||| |||| ||| ||||| | | ||||| || |
Sbjct 63417 GGAACTCGAAGACATCGGCGTGCCACGGCTCCAGGTAGATGGCAAATGCACCAGGGCGCT 63476
Query 63418 TGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAA 63477
|||| || ||||| || | || | || ||||| ||| | || | || ||| |||| ||
Sbjct 63477 TGTTACCACCCTGGTCGACATAGCGTGCAGTGTTGTTAAACACACGCAGCATAGGAACAA 63536
Query 63478 TACCGTTTGATATACCATTGGTACCGGAGATATAGCCTCCACTGGCACGAATA--TTACT 63535
||||||| || || ||||| || || || || | || |||||| |
Sbjct 63537 TACCGTTGGAGGAGCCGTTGGTTCCACCAATGTAAGAACCGGTAGCGCGAATACGGTGGA 63596
Query 63536 AATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTC 63595
||| ||||| || || || || | || ||||| | || ||| || | || ||
Sbjct 63597 CATT--CAGACCGATACCACCAGCGGTCTTGGAGATCATGGCACATGTCTTGAGAGTATC 63654
Query 63596 ATAGATGCCTTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTG 63655
||||| || || ||||| ||| || ||| | | || || || | | ||| |
Sbjct 63655 GTAGATACCCTCAATGCTGTCAGCGCTCACATCGACCAGGAAGCAAGATGCAAGCTGGGG 63714
Query 63656 ACGAGTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAG 63715
| | ||| | ||||| || | || ||||| ||||| || || | || | || |
Sbjct 63715 CTGGGGAGTAGCGGCATTGAACAGAGTGGGAGAGGCGTGGGTGAAGTACTTCTGGGACAT 63774
Query 63716 TAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACG 63775
| | ||| |||||||| || || |||||| || ||||| || || |||||
Sbjct 63775 CAAGTGGTATGTCTCAATGGCCCTCTCGATATCCTCGCCGTGGATTCCGACAGCAACACG 63834
Query 63776 CATTAACATGTGCTGAGGTCTTTCAACAATTTTGTTGTTTATTTTCAACAAGTAGGATTT 63835
||| | || ||||||||| | ||| ||| ||| ||| || | | ||| ||
Sbjct 63835 CATCAGCAAGTGCTGAGGACGCTCAGCAACATTGCCGTTAATGCGAAGAAGGTATGAACG 63894
Query 63836 TTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGA 63895
|| | || || || || || ||||||| ||||| || ||||| | ||| ||||
Sbjct 63895 CTCGAGGGTCTTGAATCCGAAGAAGTTGTAGTTGAAGTCACGGTCGTACACAATGGCCGA 63954
Query 63896 ATTGAGCTTATCCTTATATTTGTTAACTATATC--CATGGTAATACTTGAAATAATCGGA 63953
||||||| || | || | || || || ||| | | |||| || || |||
Sbjct 63955 GTTGAGCTCCTCGGCGTGCTTCATTACAATCTCGTAATGTTCCT--TTGAGATCATAGGA 64012
Query 63954 GAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAAT 64013
| | | || ||||| || || || |||| | | | ||| || || | |||
Sbjct 64013 GCAGGCTTATTGTTTTTGGGGTTCACGTAGTGGTACAGATCGGAGATGACCATAGAGAAT 64072
Query 64014 AGtttttttGTTTCCTTGTGTAGATTTGATATGGCTATTCTGGCGGCTAGAATGGCATAA 64073
| ||||| |||| |||||| || || || | ||| || | || || |||||||| ||
Sbjct 64073 TGCTTTTTAGTTTGCTTGTGGAGGTTCGAAACGGCGATACGTGCAGCCAGAATGGCGTAG 64132
Query 64074 TCCGGATGT 64082
|| || |||
Sbjct 64133 TCGGGGTGT 64141
>seq114
Length=94865
Score = 111 bits (122), Expect = 2e-19
Identities = 117/154 (76%), Gaps = 0/154 (0%)
Strand=Plus/Plus
Query 33573 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAA 33632
|||| || ||| ||||| || ||| |||||||| || | | || | ||||| ||
Sbjct 8074 AACAGCAGACAAGCGAAGTCAGTGTGGAGACCCTCATCACGAGAGATCAGCTCGTTGGAG 8133
Query 33633 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCG 33692
|| ||||| || ||||| ||||||||||| || ||||| || ||||| |||||||| ||
Sbjct 8134 AAAGTGAGACCAGGCATCAGGCCACGCTTCTTGAGCCAGAAGATGGAGGCGAATGAGCCA 8193
Query 33693 GAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAA 33726
|| |||||||| || || || || || |||||||
Sbjct 8194 GAGAAGAAGATACCCTCGACAGCGGCGAAGGCAA 8227
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 629810396461200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |