Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20nordicum_20[genbank_20GCA_5F000733025.2_202015-07-10]
915 sequences; 30,421,340 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq203 183 5e-42
seq197 159 5e-35
>seq203
Length=46013
Score = 183 bits (202), Expect = 5e-42
Identities = 203/268 (76%), Gaps = 2/268 (1%)
Strand=Plus/Plus
Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490
||| ||||| || |||| ||||| | || || |||||||| |||||||||||||| ||||
Sbjct 24015 CGCCAAGCGCCACCGCAAGATCT-TGCGTGACAACATCCAGGGAATCACCAAGCCCGCTA 24073
Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550
|||| ||||| || || ||||| || ||||||||| |||| | || |||| || ||||
Sbjct 24074 TCCGCCGTCTCGCCCGCCGTGGCGGTGTCAAGCGTATCTCCGCGATGATCTACGAGGAGA 24133
Query 16551 TTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCG 16610
|| | ||| | ||| |||||| || |||| |||| ||| || || ||| ||||
Sbjct 24134 CCCGCGGTGTGCTCAAGTCCTTCCTTGAGTCCGTCATCCGTGACGCCGTCACCTACACCG 24193
Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670
|||||||||| |||||||| ||||||||| | || ||||||| || | || || || |
Sbjct 24194 AGCACGCTAAGCGTAAGACCGTCACCTCCCTCGACGTCGTCTACGCCCTTAAGCGCCAGG 24253
Query 16671 GCCGTAAGATTTATGGTTTTGGAAGTTA 16698
|||||| | || ||||| || ||||
Sbjct 24254 GCCGTACCCTCTACGGTTTCGGTGGTTA 24281
>seq197
Length=49048
Score = 159 bits (176), Expect = 5e-35
Identities = 187/250 (75%), Gaps = 2/250 (1%)
Strand=Plus/Minus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|| |||||||| |||| ||| | | || || ||||| || ||||| |||||||| |||||
Sbjct 13516 GCCAAGCGTCACCGCAAGATTT-TGCGTGACAACATTCAGGGAATTACCAAGCCCGCTAT 13458
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
||||||||| || || |||||||| ||||||||| |||| | || |||| || ||||
Sbjct 13457 CCGTCGTCTCGCACGCCGTGGTGGTGTCAAGCGTATCTCCGCTATGATCTACGAGGAGAC 13398
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
|||| ||| | |||| ||||||| || || |||| ||| ||| | ||| || ||
Sbjct 13397 CCGTGGTGTCCTCAAGACCTTCCTCGAGGGTGTCATCCGTGACGCTGTTACCTACACTGA 13338
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
|||||| || || |||||||| || || | || | ||||| || | || || || ||
Sbjct 13337 GCACGCCAAGCGCAAGACTGTTACTTCTCTTGACGTTGTCTACGCTCTCAAGCGCCAGGG 13278
Query 16672 CCGTAAGATT 16681
||||||| ||
Sbjct 13277 CCGTAAGTTT 13268
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79074363409095
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |