Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20nordicum_20[genbank_20GCA_5F000733025.2_202015-07-10]
915 sequences; 30,421,340 total letters
Query= NC_008168.1
Length=104710
Score E
Sequences producing significant alignments: (Bits) Value
seq402 132 3e-26
seq8 111 1e-19
seq36 95.1 8e-15
>seq402
Length=8295
Score = 132 bits (146), Expect = 3e-26
Identities = 85/93 (91%), Gaps = 5/93 (5%)
Strand=Plus/Plus
Query 25904 GCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGTTA 25958
|||||||||| ||||||||||||||||||||||||||||||| || ||||||||||
Sbjct 2446 GCCCGTTCCCCTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTA 2505
Query 25959 ATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
|||| ||||||||||||||||||||||||||||
Sbjct 2506 ATCCATTCATGCGCGTCACTAATTAGATGACGA 2538
>seq8
Length=305437
Score = 111 bits (122), Expect = 1e-19
Identities = 202/293 (69%), Gaps = 12/293 (4%)
Strand=Plus/Plus
Query 6201 TTCTACCGCTACAAAATGCCGCGCATCTGC--GCCAAGGTCGAGGGTAAGGGAAACGGTA 6258
||||| |||||||| ||| | | | || | || ||||||||||| ||||| |||||||
Sbjct 221832 TTCTATCGCTACAAGATG--GAGAAGCTCCAGGCTAAGGTCGAGGGCAAGGGCAACGGTA 221889
Query 6259 TTAAAACCGTCATTGTCAACATGCCTGAAGTCGCTA----AGGCGCTCGGACGCCCTGCC 6314
|||| ||||| | |||||| ||||| ||| | || | ||| | || ||| |
Sbjct 221890 TTAAGACCGTTGTCGTCAAC----CTGAACTCGGTTGCCCAGTCCCTCAGTCGGCCTCCT 221945
Query 6315 ACCTACCCGACGAAATATTTCGGGTGCGAACTTGGCGCTCAGACGCAGTTTGATCACAAA 6374
|||| | | || || ||||| | || ||||| || ||| | | | | | |
Sbjct 221946 GCCTATCTCATCAAGTACTTCGGATTTGAGCTTGGTGCACAGGCCAACGCTAAGCCCTCT 222005
Query 6375 AACGAGCGCTTCATCGTTAACGGATCGCATAACTCTGCCAAGCTGCAGGACTTACTTGAC 6434
||||||| | ||| | ||||| || || || | ||||||| ||||| | || |||
Sbjct 222006 GACGAGCGTTGGATCATCAACGGTTCTCACGACGCCCCCAAGCTCCAGGATTACCTCGAC 222065
Query 6435 GGCTTTATTCGCAAGTTTGTGCTGTGTCGGGAATGCGATAACCCGGAGACCGA 6487
||||| || ||||||||||||||| | | ||| | ||||| ||||||||
Sbjct 222066 GGCTTCATCTCCAAGTTTGTGCTGTGCAAGAAGTGCAAGAACCCCGAGACCGA 222118
>seq36
Length=176580
Score = 95.1 bits (104), Expect = 8e-15
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150
||||| | | ||||||||||| || |||||| |||||| || || ||||| || ||
Sbjct 98610 CCACCACGAAGACGCAACACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCCGAA 98551
Query 38151 AAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGG 38210
| | |||| |||| || | || || || || || || ||||| || || || | ||
Sbjct 98550 AGAGTACGTCCGTCCTCCAGCTGCTTACCAGCGAAGATAAGGCGCTGCTGGTCAGGAGGA 98491
Query 38211 ACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACT 38270
| || || |||||| || || ||| ||||| | || ||| || || |||
Sbjct 98490 ATACCCTCCTTGTCCTGGATCTTGCTCTTGACATTATCGATAGTGTCGGATGACTCGACT 98431
Query 38271 TCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317
|| | ||||||||| || || || | || |||||||| ||||||||
Sbjct 98430 TCAAGTGTAATAGTCTTGCCAGTGAGCGTCTTCACGAAAATCTGCAT 98384
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 334943464815365
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |