Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20nordicum_20[genbank_20GCA_5F000733025.2_202015-07-10] 915 sequences; 30,421,340 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq20 122 1e-22 seq114 111 2e-19 >seq20 Length=214888 Score = 122 bits (134), Expect = 1e-22 Identities = 666/1054 (63%), Gaps = 26/1054 (2%) Strand=Plus/Plus Query 62846 TGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATC 62905 || |||||||| ||||| || |||||||| || || || || || ||||||| ||| || Sbjct 63101 TGGTTACTCTTCTTGTTGCAAGCATCCTTGTAGAGCATAAAGGGGTTACCAGTCTCAGTC 63160 Query 62906 TGAGATTCTATAATCGCTTTCCAGACGACTC-GAGCCTTTATTATAGATTTGTATCT--- 62961 || | || | ||| || | ||||| | || ||||||| || | ||| | Sbjct 63161 TGGGCCTCAAGAATGGCGTACCAGA-GCTTCTGAGCCTTGATGGTC---TTGCGGCCACG 63216 Query 62962 -CTTTTCTCTTTCGTA--TAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTC 63018 | || || | |||| | | ||| | | |||||||| || || | |||| | Sbjct 63217 GCCTTCCTGCT-CGTACTTCGCGTAGAGAGCA--TCGAACTCATCGCCGTAGACATCAGC 63273 Query 63019 CAGTCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTT 63078 ||| || || || | || || | | | ||| || |||| ||| || || || Sbjct 63274 CAGACCGGGGGCCTCGTTGGGGCAGAAGAGGGTCCAGTCACCGTTGGCCTCAACACGCTT 63333 Query 63079 CATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTT 63138 ||| |||||||| || |||| | ||| || || || | | | | ||||| || Sbjct 63334 CATGAAGAGATCGGGGGTCCACAAAGCGTAGAAGAGGTCACGAGCGCGAACCTCCTCCTT 63393 Query 63139 TCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTA 63198 || ||||| |||||||||||| | | | ||| | |||||||| |||| ||| Sbjct 63394 ACCGTGGTTCTTCCGCAGATCGAGGAACTCGAAGACATCGGCGTGCCACGGCTCCAGGTA 63453 Query 63199 TATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATT 63258 ||||| | | ||||| || ||||| || ||||| || | || | || ||||| || Sbjct 63454 GATGGCAAATGCACCAGGGCGCTTGTTACCACCCTGGTCGACATAGCGTGCAGTGTTGTT 63513 Query 63259 ATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCTGAGATATAGCT 63318 | | || | || ||| |||| |||||| ||||| | || ||||| || || || Sbjct 63514 AAACACACGCAGCATAGGAACAATACCGTTGGAGGAGCCGTTGGTTCCACCAATGTAAGA 63573 Query 63319 TCCACTGGCACGAATA--TTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATT 63376 || | || |||||| | ||| ||||| || || || || | || ||||| Sbjct 63574 ACCGGTAGCGCGAATACGGTGGACATT--CAGACCGATACCACCAGCGGTCTTGGAGATC 63631 Query 63377 AATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGT 63436 | || ||| || | ||||| ||||| ||||| || || ||| | ||| | | Sbjct 63632 ATGGCACATGTCTTGAGAGTATCGTAGATACCCTCAATGCTGTCAGCGCTCACATCGACC 63691 Query 63437 AGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCG 63496 || || || | | ||| | | ||| | ||||| || | || ||||| ||| Sbjct 63692 AGGAAGCAAGATGCAAGCTGGGGCTGGGGAGTAGCGGCATTGAACAGAGTGGGAGAGGCG 63751 Query 63497 TGAGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCAT 63556 || || || | || | || | | | ||| |||||||| || || |||||| Sbjct 63752 TGGGTGAAGTACTTCTGGGACATCAAGTGGTATGTCTCAATGGCCCTCTCGATATCCTCG 63811 Query 63557 TGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTG 63616 || ||||| || || |||||||| | || ||||||||| | ||| | | ||| | Sbjct 63812 CCGTGGATTCCGACAGCAACACGCATCAGCAAGTGCTGAGGACGCTCAGCAACATTGCCG 63871 Query 63617 TTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAG 63676 || || | | ||| || || | || || || || || ||||||| ||| Sbjct 63872 TTAATGCGAAGAAGGTATGAACGCTCGAGGGTCTTGAATCCGAAGAAGTTGTAGTTGAAG 63931 Query 63677 TCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACATCCATG 63736 || || ||||| | ||| |||||||||| |||| | || | |||| | | Sbjct 63932 TCACGGTCGTACACAATGGCCGAGTTGAG---CTCCTCGGCGTGCTTCATTACAATC-TC 63987 Query 63737 GTAAT----ACTTGAAATAATAGGAAAATGTTTCCCATTTTTAGGATTGACATAGTTGAA 63792 ||||| |||| || |||||| | | || ||||| || || || |||| | | Sbjct 63988 GTAATGTTCCTTTGAGATCATAGGAGCAGGCTTATTGTTTTTGGGGTTCACGTAGTGGTA 64047 Query 63793 TAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGC 63852 | ||| || || | ||| | ||||| |||| ||||| || || || ||||| Sbjct 64048 CAGATCGGAGATGACCATAGAGAATTGCTTTTTAGTTTGCTTGTGGAGGTTCGAAACGGC 64107 Query 63853 TATTCTAGCGGCTAGAATGGCATAATCCGGATGT 63886 || | || || |||||||| || || || ||| Sbjct 64108 GATACGTGCAGCCAGAATGGCGTAGTCGGGGTGT 64141 >seq114 Length=94865 Score = 111 bits (122), Expect = 2e-19 Identities = 117/154 (76%), Gaps = 0/154 (0%) Strand=Plus/Plus Query 32652 AACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAA 32711 |||| || ||| ||||| || ||| |||||||| || | | || | |||||||| Sbjct 8074 AACAGCAGACAAGCGAAGTCAGTGTGGAGACCCTCATCACGAGAGATCAGCTCGTTGGAG 8133 Query 32712 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCA 32771 || ||||| || ||||| ||||||||||| || ||||| || ||||| || ||||| ||| Sbjct 8134 AAAGTGAGACCAGGCATCAGGCCACGCTTCTTGAGCCAGAAGATGGAGGCGAATGAGCCA 8193 Query 32772 GAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAA 32805 || ||||| || || || || || || ||||||| Sbjct 8194 GAGAAGAAGATACCCTCGACAGCGGCGAAGGCAA 8227 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633624752834000