Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20nordicum_20[genbank_20GCA_5F000733025.2_202015-07-10]
915 sequences; 30,421,340 total letters
Query= NC_008586.1
Length=131204
Score E
Sequences producing significant alignments: (Bits) Value
seq36 86.0 5e-12
seq37 84.2 2e-11
seq13 82.4 6e-11
>seq36
Length=176580
Score = 86.0 bits (94), Expect = 5e-12
Identities = 148/215 (69%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| ||||| || || || | || || || || | || |||||||| || | ||
Sbjct 98384 ATGCAGATTTTCGTGAAGACGCTCACTGGCAAGACTATTACACTTGAAGTCGAGTCATCC 98443
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | || || |||| || || || ||||||||||||||||| || || ||
Sbjct 98444 GACACTATCGATAATGTCAAGAGCAAGATCCAGGACAAGGAGGGTATTCCTCCTGACCAG 98503
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| || ||||| || || || || ||| | ||||| || || | || || ||||||
Sbjct 98504 CAGCGCCTTATCTTCGCTGGTAAGCAGCTGGAGGACGGACGTACTCTTTCGGACTACAAC 98563
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCG 22433
|| || || || ||||| | || | || |||||
Sbjct 98564 ATCCAGAAGGAGTCCACTCTCCACCTGGTGTTGCG 98598
Score = 84.2 bits (92), Expect = 2e-11
Identities = 123/174 (71%), Gaps = 0/174 (0%)
Strand=Plus/Plus
Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302
|| || || || |||| ||||| || || ||| |||||| | ||| | | ||
Sbjct 98180 ACTGGCAAGACCATCACCCTTGAGGTCGAGTCCAGCGATACTATCGACAACGTTAAGTCG 98239
Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362
|| || || || |||||||| || || ||||| || || ||||| || || || |||||
Sbjct 98240 AAGATCCAGGATAAGGAGGGCATCCCCCCCGACCAGCAGCGTCTCATCTTCGCAGGCAAG 98299
Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACC 22416
||| | ||||| || || | || || |||||||||||||| || ||||||
Sbjct 98300 CAGCTTGAGGACGGACGTACTCTTTCGGACTACAACATTCAAAAGGAGTCCACC 98353
>seq37
Length=176155
Score = 84.2 bits (92), Expect = 2e-11
Identities = 82/106 (77%), Gaps = 0/106 (0%)
Strand=Plus/Minus
Query 22311 AGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGA 22370
|||||||||||||||||| || || || || || || || || |||||||| ||| | ||
Sbjct 92930 AGACAAGGAGGGTATTCCCCCTGACCAGCAGCGCCTGATCTTCGCCGGCAAGCAGCTCGA 92871
Query 22371 GGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACC 22416
||| |||||| | || ||||||||||| || || || || |||
Sbjct 92870 GGACGGCCGCACTCTTTCGGATTACAACATCCAGAAGGAGTCGACC 92825
>seq13
Length=236366
Score = 82.4 bits (90), Expect = 6e-11
Identities = 126/180 (70%), Gaps = 0/180 (0%)
Strand=Plus/Minus
Query 22227 TTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGT 22286
||| || || || | || ||||| || | || || || || || | | ||| ||| |
Sbjct 25023 TTTCGTCAAGACCCTGACGGGTAAGACCATTACCCTCGATGTCGAGTCGAGCGACACCAT 24964
Query 22287 GGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCT 22346
||| | |||| || || || ||||||||||| || || ||||| || || |||||
Sbjct 24963 CGACAACGTCAAGACCAAGATCCAGGACAAGGAGGGCATCCCCCCCGACCAGCAGCGTCT 24904
Query 22347 TATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAA 22406
|| || ||||| || ||| | |||||| ||||||| | ||| |||||||| || ||
Sbjct 24903 GATCTTCGCCGGAAAGCAGCTCGAGGATGGCCGCACCCTGAGCGACTACAACATCCAGAA 24844
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419723319376975
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |