Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20nordicum_20[genbank_20GCA_5F000733025.2_202015-07-10]
915 sequences; 30,421,340 total letters
Query= NC_011616.1
Length=148634
Score E
Sequences producing significant alignments: (Bits) Value
seq13 113 4e-20
seq36 104 2e-17
>seq13
Length=236366
Score = 113 bits (124), Expect = 4e-20
Identities = 135/181 (75%), Gaps = 2/181 (1%)
Strand=Plus/Plus
Query 126926 TTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATC 126985
|| || || ||||| |||| || ||||| ||| || ||||| ||||| ||| |||||
Sbjct 24844 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGATC 24903
Query 126986 AATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTC 127044
| |||||||| ||||| || ||||||||||||||| ||| || ||||| |||| ||
Sbjct 24904 AGACGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGTCTTGACGTTG-TC 24962
Query 127045 GACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAA 127104
|| |||||| | |||||| |||| ||| | || || || ||||| || || || ||
Sbjct 24963 GATGGTGTCGCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 25022
Query 127105 A 127105
|
Sbjct 25023 A 25023
>seq36
Length=176580
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946
||||| || | |||||||||| || | || ||||| || || || ||||| ||
Sbjct 98610 CCACCACGAAGACGCAACACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCCGAA 98551
Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006
| || || || || ||||| || |||||| |||| | |||||||| || |||||
Sbjct 98550 AGAGTACGTCCGTCCTCCAGCTGCTTACCAGCGAAGATAAGGCGCTGCTGGTCAGGAGGA 98491
Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066
|| |||||||||||| ||| || ||||| | |||| ||||| | |||||||
Sbjct 98490 ATACCCTCCTTGTCCTGGATCTTGCTCTTGACATTATCGATAGTGTCGGATGACTCGACT 98431
Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|| | || | || ||||| || || || || || |||||||||||
Sbjct 98430 TCAAGTGTAATAGTCTTGCCAGTGAGCGTCTTCACGAAAATCTGCAT 98384
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 475495361459600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |