Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20nordicum_20[genbank_20GCA_5F000733025.2_202015-07-10]
915 sequences; 30,421,340 total letters
Query= NC_013772.1
Length=176677
Score E
Sequences producing significant alignments: (Bits) Value
seq13 136 4e-27
seq36 127 2e-24
seq37 102 9e-17
>seq13
Length=236366
Score = 136 bits (150), Expect = 4e-27
Identities = 141/182 (77%), Gaps = 2/182 (1%)
Strand=Plus/Plus
Query 46404 CCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 46463
|||| ||||| ||||||||| || ||||| | || ||||||||||| |||||||| |
Sbjct 24842 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGA 24901
Query 46464 TCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG 46523
||| ||||||||||||| || | || |||||||||| |||||| |||||| ||| |
Sbjct 24902 TCAGACGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGTCTTGA-CGTTG 24960
Query 46524 -CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACA 46582
| | ||||||||||| || ||||| | || ||||| || |||||||| || || ||
Sbjct 24961 TCGATGGTGTCGCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACG 25020
Query 46583 AA 46584
||
Sbjct 25021 AA 25022
>seq36
Length=176580
Score = 127 bits (140), Expect = 2e-24
Identities = 171/238 (72%), Gaps = 0/238 (0%)
Strand=Plus/Minus
Query 46356 TATATTATTTGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATAT 46415
|| |||| | ||| || | | |||||||||||| || | || |||||| ||||| |
Sbjct 98621 TAAATTACTGGCCACCACGAAGACGCAACACCAGGTGGAGAGTGGACTCCTTCTGGATGT 98562
Query 46416 TGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCT 46475
||||||| || ||||| || |||| || |||||||| || ||||| || | ||||||||
Sbjct 98561 TGTAGTCCGAAAGAGTACGTCCGTCCTCCAGCTGCTTACCAGCGAAGATAAGGCGCTGCT 98502
Query 46476 GGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGC 46535
|||| | || | | |||||||||| |||||| |||||| | | | ||||||
Sbjct 98501 GGTCAGGAGGAATACCCTCCTTGTCCTGGATCTTGCTCTTGACATTATCGATAGTGTCGG 98442
Query 46536 TCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
|| || || || | || || || ||||| || ||||| || || || || |||||
Sbjct 98441 ATGACTCGACTTCAAGTGTAATAGTCTTGCCAGTGAGCGTCTTCACGAAAATCTGCAT 98384
Score = 113 bits (124), Expect = 5e-20
Identities = 128/169 (76%), Gaps = 2/169 (1%)
Strand=Plus/Minus
Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461
||||||||| || |||||||| || ||||| || |||| || ||||||||||| |||||
Sbjct 98347 CTCCTTTTGAATGTTGTAGTCCGAAAGAGTACGTCCGTCCTCAAGCTGCTTGCCTGCGAA 98288
Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521
|| | ||||||||||||| || | || |||||| ||| ||||||| ||| | |||
Sbjct 98287 GATGAGACGCTGCTGGTCGGGGGGGATGCCCTCCTTATCCTGGATCTTCGACTT-AACGT 98229
Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGT 46569
| | | || ||||| || || || || | |||||||| ||||| ||
Sbjct 98228 TGTCGATAGTATCGCTGGACTCGACCTCAAGGGTGATGGTCTTGCCAGT 98180
>seq37
Length=176155
Score = 102 bits (112), Expect = 9e-17
Identities = 82/99 (83%), Gaps = 0/99 (0%)
Strand=Plus/Plus
Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461
|||||| ||||| ||||| || || |||||||| |||| ||||||||||||||||||||
Sbjct 92831 CTCCTTCTGGATGTTGTAATCCGAAAGAGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAA 92890
Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTC 46500
|||| |||||||||||| | || | | |||||||||
Sbjct 92891 GATCAGGCGCTGCTGGTCAGGGGGAATACCCTCCTTGTC 92929
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 565231935085800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |