Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20nordicum_20[genbank_20GCA_5F000733025.2_202015-07-10]
915 sequences; 30,421,340 total letters
Query= NC_015398.1
Length=101487
Score E
Sequences producing significant alignments: (Bits) Value
seq36 95.1 8e-15
seq13 84.2 1e-11
>seq36
Length=176580
Score = 95.1 bits (104), Expect = 8e-15
Identities = 153/218 (70%), Gaps = 8/218 (4%)
Strand=Plus/Minus
Query 34769 CAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATC 34828
||| |||| ||| | ||| || ||||| ||||| ||||||||||| | ||| | ||
Sbjct 98596 CAACACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTACGTCCGTC 98537
Query 34829 ATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34888
|||||||| || || || || || || || |||||||| | || | |||||||||||
Sbjct 98536 CTCCAGCTGCTTACCAGCGAAGATAAGGCGCTGCTGGTCAGGAGGAATACCCTCCTTGTC 98477
Query 34889 GCTAATCTTCTGTTTGACGGATGCTATCGAT----TCACCGGCCTCAACATCGACGGTTA 34944
||||| ||||| || ||||||| || | ||| || || | || |
Sbjct 98476 CTGGATCTTGCTCTTGAC--AT--TATCGATAGTGTCGGATGACTCGACTTCAAGTGTAA 98421
Query 34945 TGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982
| || || || ||||| |||||||| || |||||||||
Sbjct 98420 TAGTCTTGCCAGTGAGCGTCTTCACGAAAATCTGCATA 98383
>seq13
Length=236366
Score = 84.2 bits (92), Expect = 1e-11
Identities = 126/179 (70%), Gaps = 0/179 (0%)
Strand=Plus/Plus
Query 34794 TTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATT 34853
||||| ||||| ||||| ||| | || |||| || ||||| |||||||| || ||
Sbjct 24844 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGATC 24903
Query 34854 AGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCT 34913
|| || |||||||| | || | ||||||||||| ||||| |||||| |
Sbjct 24904 AGACGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGTCG 24963
Query 34914 ATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAA 34972
|| | || | | ||| ||||||| ||| ||||| || ||||| || ||||| || ||
Sbjct 24964 ATGGTGTCGCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 25022
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 324629979828120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |