Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20nordicum_20[genbank_20GCA_5F000733025.2_202015-07-10]
915 sequences; 30,421,340 total letters
Query= NC_021858.1
Length=1908524
Score E
Sequences producing significant alignments: (Bits) Value
seq114 143 3e-28
seq20 122 1e-21
seq172 105 8e-17
seq4 104 3e-16
seq79 98.7 1e-14
>seq114
Length=94865
Score = 143 bits (158), Expect = 3e-28
Identities = 179/243 (74%), Gaps = 2/243 (1%)
Strand=Plus/Plus
Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750
||||| ||| || || || ||| |||||| |||||||||||||| | || |||||
Sbjct 7789 GCCTTCTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCAGCCAGGGAGATG 7848
Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCG 868810
||||||| | ||| ||||||| | ||||||| ||| | | ||||| | | |
Sbjct 7849 GACTCCATGAAGTCGAAGGGGTTGGTAGCGTTGTAGTACTTCTTGTTGCCGAGGGCCACC 7908
Query 868811 AGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATG 868870
||||||||||| ||||| ||||||||||||| |||||| || || ||||||||| |
Sbjct 7909 AGCAGGCGGTCAGCGACGAACTCGATGTACTCGCACATCAGCTTGGAGTTCATGCCAAGC 7968
Query 868871 AGCGCCAC-CGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGAT 868929
|| |||| || || | || ||| ||||| | |||||| ||||||||||||| ||
Sbjct 7969 AG-ACCACAGGGAAGAGCGTCAGTCAGGAACTCCTGCTCGATGCCGACGGCCTCGACAAT 8027
Query 868930 GAT 868932
|||
Sbjct 8028 GAT 8030
Score = 118 bits (130), Expect = 1e-20
Identities = 178/251 (71%), Gaps = 3/251 (1%)
Strand=Plus/Plus
Query 869633 GAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTTGG 869692
|||||||||||||| || ||||||||||||||| ||| | |||| | | |||
Sbjct 8443 GAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCAACGGGCCTCGGGGATCTGG 8502
Query 869693 ACCTCCTTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGAAA 869752
||||| |||| || || | ||||||||| || ||||| ||| |||||||||
Sbjct 8503 ACCTCGGAACTGAAACGTTCGACAAGGTTCTCGTTGACAATGCCATCGGAGGCGGCGAAG 8562
Query 869753 AAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCTGA-GCG--ACACCCAGTGG 869809
|||||||||||||| ||| |||| ||||| |||||| | | ||| ||||| |
Sbjct 8563 AAAGCCAGGACGTGGGAGATGAAGTAACGCTCATCGTCGTTCAGGCGGTTGTGCCAGTCG 8622
Query 869810 ACGGTGTCGGCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTTTG 869869
|| | ||| || | ||| ||||| ||||||| ||||| |||||||| |||
Sbjct 8623 TGAAGATCCTTGGAGAGATCAATCTCTTCGGCAGTCCAGAAAGAGGCTTCGGCCTTCTTG 8682
Query 869870 TACATCTCCCA 869880
||||| | |||
Sbjct 8683 TACATTTGCCA 8693
Score = 107 bits (118), Expect = 2e-17
Identities = 141/195 (72%), Gaps = 9/195 (5%)
Strand=Plus/Plus
Query 869179 ACCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTT 869238
||| || || ||| ||||| |||||| || | ||| || ||||| ||||| |||||
Sbjct 8103 ACCCTCATCACGAGAGATCAGCTCGTTGGAGAAAGTGAGACCAGGCATCAGGCCACGCTT 8162
Query 869239 CTTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 869298
||||||||| ||||||| | ||| ||| ||||| ||||| |||||||| ||||| ||
Sbjct 8163 CTTGAGCCAGAAGATGGAGGCGAATGAGCCAGAGAAGAAGATACCCTCGACAGCGGCGAA 8222
Query 869299 GCCGATGAGCCGCTCGGCAAAGGT---GTCGAGGCCCTCCTTGTTGATCCACTTCATCGC 869355
| | | || ||| || ||||| ||| || | |||||||||||| | ||
Sbjct 8223 GGCAACCAGACGCGAAGCGAAGGTTGACTCGCGG------TCGTTGATCCACTTGAGGGC 8276
Query 869356 CCAGTCGGCCTTTTT 869370
||||| |||||| ||
Sbjct 8277 CCAGTTGGCCTTCTT 8291
>seq20
Length=214888
Score = 122 bits (134), Expect = 1e-21
Identities = 286/435 (66%), Gaps = 8/435 (2%)
Strand=Plus/Plus
Query 1628162 ACTGGACGATCTCGGTGCACAGGTTGGC-CGACGTCGTCGTACCCAGGTTCTGCTGGTTG 1628220
||| ||| ||||| ||||||||||||| | ||| | ||||||||||||| ||||||
Sbjct 63048 ACTCGACAATCTCAGTGCACAGGTTGGAGCTACGAA-TAGTACCCAGGTTCTTCTGGTTA 63106
Query 1628221 GTGGTCAGGTTGACGGCGTCCTTGTGGAGCATGTAGGGCGCGCCGGTCTCGATCTGCGCC 1628280
| || |||| || ||||||| |||||| |||| || ||||| |||| |||
Sbjct 63107 CTCTTCTTGTTGCAAGCATCCTTGTAGAGCATAAAGGGGTTACCAGTCTCAGTCTGGGCC 63166
Query 1628281 GCGACGATGGCCGACCAGATCTGGCGCGCGGGCACGACAGTCC-GCG--CGCGGCCCTNN 1628337
| | ||||| |||||| || | || | || ||| ||| | ||||| |
Sbjct 63167 TCAAGAATGGCGTACCAGAGCTTCTGAGC---CTTGATGGTCTTGCGGCCACGGCCTTCC 63223
Query 1628338 NNNNNNNNNNNNNNNNNNNNNNNNTCAAAGGCCGCGCCGTAGCACTCGTGCAGGCCGGGC 1628397
|| || | |||||||| || ||| |||||
Sbjct 63224 TGCTCGTACTTCGCGTAGAGAGCATCGAACTCATCGCCGTAGACATCAGCCAGACCGGGG 63283
Query 1628398 GCCTCGGACGGACAAAAGAGCGACCAGTCGCCACCGGTCACCGCGCGGCGCATAAAGAGG 1628457
|||||| || || ||||| | |||||| || || | | | || ||| |||||
Sbjct 63284 GCCTCGTTGGGGCAGAAGAGGGTCCAGTCACCGTTGGCCTCAACACGCTTCATGAAGAGA 63343
Query 1628458 TCACACGTCCACAGTGCGTAAAAGAGGTCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTC 1628517
|| ||||||| ||||| |||||||| || || || ||||||||| |||||||||
Sbjct 63344 TCGGGGGTCCACAAAGCGTAGAAGAGGTCACGAGCGCGAACCTCCTCCTTACCGTGGTTC 63403
Query 1628518 TTTTTGAGGTCGAGCCAGTCGACAATGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAG 1628577
|| || ||||| | |||| | |||||||||||||||||||||||| ||||||
Sbjct 63404 TTCCGCAGATCGAGGAACTCGAAGACATCGGCGTGCCACGGCTCCAGGTAGATGGCAAAT 63463
Query 1628578 GCGCCCTTGCGCTTG 1628592
|| || |||||||
Sbjct 63464 GCACCAGGGCGCTTG 63478
>seq172
Length=56914
Score = 105 bits (116), Expect = 8e-17
Identities = 90/111 (81%), Gaps = 0/111 (0%)
Strand=Plus/Plus
Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245
|| ||||||||| | || || ||| | || ||||| | || |||||| | || || |||
Sbjct 32253 GCTGCCAACTACTTGGATATTAAGGCCCTCCTCGACGTCGGCTGCAAGACAGTCGCTAAC 32312
Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAAG 1592296
||||||||||||||||| || ||||||||||| |||||||| |||||| ||
Sbjct 32313 ATGATCAAGGGCAAGTCCCCGGAGGAGATCCGTAAGACCTTCAACATCCAG 32363
>seq4
Length=381055
Score = 104 bits (114), Expect = 3e-16
Identities = 118/157 (75%), Gaps = 1/157 (1%)
Strand=Plus/Minus
Query 19047 GACAGCATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGCGAG 19106
||||||||||| || || || || || ||| |||||||| || | || || ||||||
Sbjct 155542 GACAGCATCGGTGGAACCGTAACATGTGTGATCCGCAACGTACCAGTTGGACTTGGCGAG 155483
Query 19107 CCGTGCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCCACC 19166
|| ||||| || ||| | || || ||||| |||||||||||| ||||| || |||
Sbjct 155482 CCCTGCTTCGATAAGCTTGAAGCTAAGCTCGGCCACGCCATGCTCAGTATCCCCGCAACC 155423
Query 19167 AAGGGATTCGAGATTGGCAGCGGGTT-TGCGGGTGCG 19202
||||| |||||| ||||| ||| || |||| ||||
Sbjct 155422 AAGGGCTTCGAGGTTGGCTCCGGTTTCGGCGGCTGCG 155386
Score = 96.9 bits (106), Expect = 4e-14
Identities = 214/319 (67%), Gaps = 8/319 (3%)
Strand=Plus/Minus
Query 18099 TGGCGAGTCGCACGGGGCGGGCGTCGGCTGCATCATCGACGGCGTGCCGCCGTGCATGCC 18158
||||||||| ||| | ||||||||| ||| |||| || || || || |
Sbjct 156230 TGGCGAGTCCCACTGTCGCTCCGTCGGCTGTATCGTCGATGGATGTCCTCCAGGCCTAGA 156171
Query 18159 ACTGGCCGAGGCCGACATCCAGCCTCAGTTGGATCGGCGCCGACCGGGCCAGGGCGCACT 18218
| | |||||||||||||||||||||| || |||||||| || ||||| |||| ||
Sbjct 156170 AATCACCGAGGCCGACATCCAGCCTCAAATGACCCGGCGCCGTCCCGGCCAAAGCGCCCT 156111
Query 18219 TTCCACGCCGCGCAACGAGCCCGATCGCGTCATCATCCAGTCGGGCACGGAGAACGGCCT 18278
| | || ||||| ||||| || || ||| |||||||| ||||| ||| |||| |
Sbjct 156110 TACTACCCCGCGAGACGAGAAGGACCGAGTCGAGATCCAGTCAGGCACAGAGTTCGGCAT 156051
Query 18279 CACGCTCGGCTCGCCCGTCGGCCTCTTTGTGGCCAACCGCGACCAGCGGCCCGTCGACTA 18338
||| || ||| | || | | | | | || ||| |||||||| || |||||
Sbjct 156050 CACTCTGGGCACACCAATTGCCATGGTCGTCCGCAATGAGGACCAGCGTCCTAAGGACTA 155991
Query 18339 TTCCGACATGTGCAA------GGTGCCGCGGCCCT-CACACGCCGACTACACCTACATGG 18391
| ||| | ||| || || | ||||| || ||||||| ||||||| | |
Sbjct 155990 CGGCAACA-GCACAATGGACCTGTACCCCCGCCCTAGCCATGCCGACTTCACCTACCTTG 155932
Query 18392 CCAAGTACGGCATCAAGGC 18410
|||||||| |||||||
Sbjct 155931 AGAAGTACGGTGTCAAGGC 155913
>seq79
Length=123411
Score = 98.7 bits (108), Expect = 1e-14
Identities = 249/370 (67%), Gaps = 19/370 (5%)
Strand=Plus/Plus
Query 1726685 TGCGGCTGGGCGGCGGCGCGCACGGCGTCGAGTGCCGTCGCCACGCTCCCGTCGGTGCCG 1726744
|| || || | |||||| | | |||||||| || | || | | ||||||||||||
Sbjct 12756 TGGGGGTGCGAGGCGGCACCGATGGCGTCGACAGCGACGGTCAGGTTACCGTCGGTGCCG 12815
Query 1726745 TTCTTGAAGCCGATGGCCAGCGGCAGTGCCGACGCCATCTCGCGGTGCACCTGGCTCTCG 1726804
|||||| ||||||||| | | ||| | || || | ||||||||| | ||| ||||
Sbjct 12816 TTCTTGTAGCCGATGGGGAAGGACAGGCCTGAGGCGAGCTCGCGGTGAAGCTGAGACTCG 12875
Query 1726805 GTCGTGCGCGCGCCCACGGCGCCCCACGCCACCAGGTCTGCCA---AATAAGGGGCCACC 1726861
|| ||||| ||||| | |||||| | | ||||||||||| | | |||||
Sbjct 12876 GTAGTGCGAGCGCCGATCGCGCCCAGAGAGATCAGGTCTGCCAGGTACTGAGGGG----- 12930
Query 1726862 AGA-GGACT-GAGAAACTCGACGGCCACGGGCTGATCGACGGCGACGACGAGATCGCGCA 1726919
||| || | ||| | |||| ||| | ||| | || ||| | | || |||
Sbjct 12931 AGATGGTGTCGAGCATCTCGGAGGCGATGGGGAG-TC--CGGTGCTGGTCAGGTCGGTGT 12987
Query 1726920 ACAG---GCGGCGCGACGCCGTCAGGCCGTCGGCCAGGCGGCACGACCCGTCGAGGTCGG 1726976
|||| ||| | ||||| ||| || | | | | | | | | |||||| ||||
Sbjct 12988 ACAGCTTACGG-GAGACGC--GCAGACCCTTGTTGATGTTGAAGGTCTCGTCGATATCGG 13044
Query 1726977 GGTCGCTGGCCAGGCCCTTCCACCCGACGGTCGTGCGCGGCTTTTCGACATAGGCGCGCA 1727036
| ||| || ||| |||||||| ||||| || ||||| ||||| || | ||||| ||||
Sbjct 13045 GATCGTTGATCAGTCCCTTCCAGCCGACCGTTGTGCGGGGCTTCTCCAGGTAGGCACGCA 13104
Query 1727037 TGACCACGCA 1727046
||| ||||||
Sbjct 13105 TGATCACGCA 13114
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 6107064110815055
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |