Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20nordicum_20[genbank_20GCA_5F000733025.2_202015-07-10] 915 sequences; 30,421,340 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq36 96.9 8e-15 seq20 91.5 3e-13 >seq36 Length=176580 Score = 96.9 bits (106), Expect = 8e-15 Identities = 145/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || |||||||| || || || || || | ||||| || || ||||| |||| Sbjct 98399 AAGACGCTCACTGGCAAGACTATTACACTTGAAGTCGAGTCATCCGACACTATCGATAAT 98458 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| ||||| || || || || || ||| || ||| || | ||||||||| Sbjct 98459 GTCAAGAGCAAGATCCAGGACAAGGAGGGTATTCCTCCTGACCAGCAGCGCCTTATCTTC 98518 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || || |||||| |||| || ||| | ||| | | || |||||| ||||||| ||||| Sbjct 98519 GCTGGTAAGCAGCTGGAGGACGGACGTACTCTTTCGGACTACAACATCCAGAAGGAGTCC 98578 Query 206365 ACTCTTCACCTTGTTTTGAGACTTCG 206390 ||||| ||||| || ||| | ||||| Sbjct 98579 ACTCTCCACCTGGTGTTGCGTCTTCG 98604 Score = 84.2 bits (92), Expect = 5e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 204752 CGAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTC 204811 ||||| | ||| || ||||| ||||| ||||| ||||||| || ||||| | | ||| Sbjct 98604 CGAAGACGCAACACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTA 98545 Query 204812 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTG 204855 | ||| || ||||||||||| || ||||||||||| || || || Sbjct 98544 CGTCCGTCCTCCAGCTGCTTACCAGCGAAGATAAGGCGCTGCTG 98501 >seq20 Length=214888 Score = 91.5 bits (100), Expect = 3e-13 Identities = 167/245 (68%), Gaps = 0/245 (0%) Strand=Plus/Plus Query 173107 GCGTCCTTGTAGACGATGAAGGGCATACCAACCTCCGCTTGAGCCACCAAAATGTGGTGC 173166 || |||||||||| || ||||| ||||| ||| | || ||| | | |||| || | Sbjct 63122 GCATCCTTGTAGAGCATAAAGGGGTTACCAGTCTCAGTCTGGGCCTCAAGAATGGCGTAC 63181 Query 173167 CAAAGTTCTTGGGCTTTTACGGTAGTTCTCGCTCTTCCTTCTTTTTCGTATCTCTCATAG 173226 || || | || || || | ||| | | | | ||||| | ||||| || | ||| Sbjct 63182 CAGAGCTTCTGAGCCTTGATGGTCTTGCGGCCACGGCCTTCCTGCTCGTACTTCGCGTAG 63241 Query 173227 AGGTCTTCGAAATCCTTCCCGTAAATTTCGTCAAGACCGGGAGCTTCCTTCGGACAAAAG 173286 || | ||||| || | ||||| | || | |||||||| || || || || || ||| Sbjct 63242 AGAGCATCGAACTCATCGCCGTAGACATCAGCCAGACCGGGGGCCTCGTTGGGGCAGAAG 63301 Query 173287 AGACTCCAATTTCCATCGGTCTCGACCCTCTTCATGAAGAGGTCGGAAGTCCAAATCGCG 173346 || |||| | || | || ||| || | |||||||||||| |||| ||||| | ||| Sbjct 63302 AGGGTCCAGTCACCGTTGGCCTCAACACGCTTCATGAAGAGATCGGGGGTCCACAAAGCG 63361 Query 173347 TAGAA 173351 ||||| Sbjct 63362 TAGAA 63366 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181806944997715