Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20nordicum_20[genbank_20GCA_5F000733025.2_202015-07-10]
915 sequences; 30,421,340 total letters
Query= NC_025412.1
Length=369360
Score E
Sequences producing significant alignments: (Bits) Value
seq36 96.9 8e-15
seq20 91.5 3e-13
>seq36
Length=176580
Score = 96.9 bits (106), Expect = 8e-15
Identities = 145/206 (70%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
|| |||||||| || || || || || | ||||| || || ||||| ||||
Sbjct 98399 AAGACGCTCACTGGCAAGACTATTACACTTGAAGTCGAGTCATCCGACACTATCGATAAT 98458
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304
|| ||| ||||| || || || || || ||| || ||| || | |||||||||
Sbjct 98459 GTCAAGAGCAAGATCCAGGACAAGGAGGGTATTCCTCCTGACCAGCAGCGCCTTATCTTC 98518
Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364
|| || |||||| |||| || ||| | ||| | | || |||||| ||||||| |||||
Sbjct 98519 GCTGGTAAGCAGCTGGAGGACGGACGTACTCTTTCGGACTACAACATCCAGAAGGAGTCC 98578
Query 206365 ACTCTTCACCTTGTTTTGAGACTTCG 206390
||||| ||||| || ||| | |||||
Sbjct 98579 ACTCTCCACCTGGTGTTGCGTCTTCG 98604
Score = 84.2 bits (92), Expect = 5e-11
Identities = 81/104 (78%), Gaps = 0/104 (0%)
Strand=Plus/Minus
Query 204752 CGAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTC 204811
||||| | ||| || ||||| ||||| ||||| ||||||| || ||||| | | |||
Sbjct 98604 CGAAGACGCAACACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTA 98545
Query 204812 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTG 204855
| ||| || ||||||||||| || ||||||||||| || || ||
Sbjct 98544 CGTCCGTCCTCCAGCTGCTTACCAGCGAAGATAAGGCGCTGCTG 98501
>seq20
Length=214888
Score = 91.5 bits (100), Expect = 3e-13
Identities = 167/245 (68%), Gaps = 0/245 (0%)
Strand=Plus/Plus
Query 173107 GCGTCCTTGTAGACGATGAAGGGCATACCAACCTCCGCTTGAGCCACCAAAATGTGGTGC 173166
|| |||||||||| || ||||| ||||| ||| | || ||| | | |||| || |
Sbjct 63122 GCATCCTTGTAGAGCATAAAGGGGTTACCAGTCTCAGTCTGGGCCTCAAGAATGGCGTAC 63181
Query 173167 CAAAGTTCTTGGGCTTTTACGGTAGTTCTCGCTCTTCCTTCTTTTTCGTATCTCTCATAG 173226
|| || | || || || | ||| | | | | ||||| | ||||| || | |||
Sbjct 63182 CAGAGCTTCTGAGCCTTGATGGTCTTGCGGCCACGGCCTTCCTGCTCGTACTTCGCGTAG 63241
Query 173227 AGGTCTTCGAAATCCTTCCCGTAAATTTCGTCAAGACCGGGAGCTTCCTTCGGACAAAAG 173286
|| | ||||| || | ||||| | || | |||||||| || || || || || |||
Sbjct 63242 AGAGCATCGAACTCATCGCCGTAGACATCAGCCAGACCGGGGGCCTCGTTGGGGCAGAAG 63301
Query 173287 AGACTCCAATTTCCATCGGTCTCGACCCTCTTCATGAAGAGGTCGGAAGTCCAAATCGCG 173346
|| |||| | || | || ||| || | |||||||||||| |||| ||||| | |||
Sbjct 63302 AGGGTCCAGTCACCGTTGGCCTCAACACGCTTCATGAAGAGATCGGGGGTCCACAAAGCG 63361
Query 173347 TAGAA 173351
|||||
Sbjct 63362 TAGAA 63366
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1181806944997715
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |