Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20nordicum_20[genbank_20GCA_5F000733025.2_202015-07-10] 915 sequences; 30,421,340 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq36 114 8e-21 >seq36 Length=176580 Score = 114 bits (126), Expect = 8e-21 Identities = 166/233 (71%), Gaps = 10/233 (4%) Strand=Plus/Minus Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538 ||| || | |||||||||||||| ||||||||| |||||| || ||||| || || || Sbjct 98611 GCCACCACGAAGACGCAACACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCCGA 98552 Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598 ||| || || |||| || || || ||||| || || || | ||||| ||||| || || Sbjct 98551 AAGAGTACGTCCGTCCTCCAGCTGCTTACCAGCGAAGATAAGGCGCTGCTGGTCAGGAGG 98492 Query 34599 CACTCCCTCCTTGTCTGTGATCTT----TTG-TTTTAACGATAAAATTGTGTCTTCGCTC 34653 | ||||||||||| |||||| ||| ||| ||||| ||||| | Sbjct 98491 AATACCCTCCTTGTCCTGGATCTTGCTCTTGACATTATCGATA-----GTGTCGGATGAC 98437 Query 34654 TCCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || ||||| | || || || || || || | ||| ||||| ||||||||||| Sbjct 98436 TCGACTTCAAGTGTAATAGTCTTGCCAGTGAGCGTCTTCACGAAAATCTGCAT 98384 Score = 84.2 bits (92), Expect = 1e-11 Identities = 90/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 34504 TGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGT 34563 ||||| ||| ||||||||||||||| || || ||||| || || |||| ||||| || Sbjct 98358 TGGAGGGTGGACTCCTTTTGAATGTTGTAGTCCGAAAGAGTACGTCCGTCCTCAAGCTGC 98299 Query 34564 TTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTT 34622 || || || || || | |||||| ||||| || || | |||||||| || |||||| Sbjct 98298 TTGCCTGCGAAGATGAGACGCTGCTGGTCGGGGGGGATGCCCTCCTTATCCTGGATCTT 98240 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314726090273195