Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20nordicum_20[genbank_20GCA_5F000733025.2_202015-07-10]
915 sequences; 30,421,340 total letters
Query= NC_029997.1
Length=105667
Score E
Sequences producing significant alignments: (Bits) Value
seq36 89.7 3e-13
>seq36
Length=176580
Score = 89.7 bits (98), Expect = 3e-13
Identities = 140/198 (71%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||||||||| || || ||||| || || || || || || ||||| || || |
Sbjct 98384 ATGCAGATTTTCGTGAAGACGCTCACTGGCAAGACTATTACACTTGAAGTCGAGTCATCC 98443
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
|||||| | || ||| | || | || || ||||| || ||| | || || || ||
Sbjct 98444 GACACTATCGATAATGTCAAGA-GCAAGATCCAGGACAAGGAGGGTATTCCTCCTGACCA 98502
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
||||| | || || || || || || ||||| |||| ||| ||| | || |||||
Sbjct 98503 GCAGCGCCTTATCTTCGCTGGTAAGCAGCTGGAGGACGGACGTACTCTTTCGGACTACAA 98562
Query 23790 CATACAAAAAGAGTCCAC 23807
||| || || ||||||||
Sbjct 98563 CATCCAGAAGGAGTCCAC 98580
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 338005830664820
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