Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20nordicum_20[genbank_20GCA_5F000733025.2_202015-07-10] 915 sequences; 30,421,340 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq36 140 8e-28 seq915 93.3 1e-13 seq13 93.3 1e-13 >seq36 Length=176580 Score = 140 bits (154), Expect = 8e-28 Identities = 164/222 (74%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| | || || |||||||||||||| || || |||| ||||| || | | ||| Sbjct 98605 ACGAAGACGCAACACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCCGAAAGAGT 98546 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | || || || |||||||| |||||||||||||| || || ||||| || |||||||| Sbjct 98545 ACGTCCGTCCTCCAGCTGCTTACCAGCGAAGATAAGGCGCTGCTGGTCAGGAGGAATACC 98486 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 |||||||| |||||||| ||| ||| ||||| ||||| || | || || || | Sbjct 98485 CTCCTTGTCCTGGATCTTGCTCTTGACATTATCGATAGTGTCGGATGACTCGACTTCAAG 98426 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || || |||||||| || | || || | ||| | ||||| Sbjct 98425 TGTAATAGTCTTGCCAGTGAGCGTCTTCACGAAAATCTGCAT 98384 >seq915 Length=28520 Score = 93.3 bits (102), Expect = 1e-13 Identities = 199/293 (68%), Gaps = 7/293 (2%) Strand=Plus/Plus Query 7441 ACGTTATATTTAATATTTGGTGGCTTTTCTGGTATTATAGGTACTATATTTTCTATGATT 7500 || ||||| ||||| |||| ||||||||| | | || || ||||| | | Sbjct 17878 ACTTTATACTTAATGTTTGCATTATTTTCTGGTTTAGTTGGAACAGCGTTTTCAGTTTTA 17937 Query 7501 ATAAGGTTAGAATTAGCTGCTCCGGGTTCTCAA-ATAT-TGAGTGGTAATAGCCAACTTT 7558 || || ||||| ||| ||| ||| ||| || |||| | || ||| ||| | | Sbjct 17938 ATCAGATTAGAGTTATCTGGTCCAGGTGTACAGTATATATCAGAC--AAT---CAATTAT 17992 Query 7559 ACAACGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATGCCGGTTA 7618 | || ||| || || |||||||| | | ||||||||||| | |||||||| | Sbjct 17993 ATAATAGTATAATAACAGCGCATGCTATCTTGATGATTTTCTTCATGGTTATGCCTGCAT 18052 Query 7619 TGATAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGATATGGCTT 7678 | || || ||||| || |||| || | || ||| | |||| | ||| |||||||| | Sbjct 18053 TAATTGGAGGTTTTGGTAATTTCTTATTACCATTACTAGTTGGAGGTCCAGATATGGCAT 18112 Query 7679 TTCCAAGGCTTAACAATATAAGTTTTTGATTACTACCGCCTTCCTTATTTCTA 7731 |||| || | || |||||||||||||||||| || ||| |||||| || Sbjct 18113 TTCCTAGATTAAATAATATAAGTTTTTGATTATTAGTTCCTAGTTTATTTTTA 18165 Score = 91.5 bits (100), Expect = 4e-13 Identities = 82/101 (81%), Gaps = 4/101 (4%) Strand=Plus/Minus Query 370672 TTCAGGATGACCAAAAAATCAGAATAAATGTTG--ATAAAGGATAGGATCGCCTCCGCCT 370729 ||||||||| ||||| ||||||||||||||||| ||||| |||||||| || || || Sbjct 18558 TTCAGGATGTCCAAAGAATCAGAATAAATGTTGGAATAAA--ATAGGATCACCACCACCA 18501 Query 370730 GATGGATCAAAAAAGCTAGTATTAAAATTTCTATCAGTTAA 370770 | | ||||||||| ||||| || |||||||||||||| Sbjct 18500 GCTACTTCAAAAAAGGATGTATTGAAGTTTCTATCAGTTAA 18460 >seq13 Length=236366 Score = 93.3 bits (102), Expect = 1e-13 Identities = 128/179 (72%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 225526 TTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATA 225585 || |||| ||||| ||| || || | ||||| || |||||||| || |||||||| Sbjct 24844 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGATC 24903 Query 225586 AGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCG 225645 || || || |||||||| || || || |||||||| |||||||| ||| || ||| Sbjct 24904 AGACGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGTCG 24963 Query 225646 ATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTTTTTATGAA 225704 |||||||| | || || || | || || ||||| ||||||| || || | ||| Sbjct 24964 ATGGTGTCGCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 25022 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192517219435010