Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20nordicum_20[genbank_20GCA_5F000733025.2_202015-07-10] 915 sequences; 30,421,340 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq50 82.4 6e-11 >seq50 Length=144532 Score = 82.4 bits (90), Expect = 6e-11 Identities = 134/187 (72%), Gaps = 6/187 (3%) Strand=Plus/Minus Query 48504 GAAGCTCGTCAAGGTGAGGCTGAGGACCCCCAGGCACCCAGAGATGGGTGACAAGTTTGC 48563 |||| |||||||||| | || | ||| ||| | ||| |||| ||||||||||| || Sbjct 115309 GAAGTTCGTCAAGGTTCGCATGCGTACCACCAAGATCCCCCAGATTGGTGACAAGTTCGC 115250 Query 48564 GTC-CTTCACGGCGCAAAAGGGGACATGTGGAGCCGTCCTGACC--CAGGAGGACATGCC 48620 || | |||||| || ||||| || ||| | ||| ||| |||||||||||||| Sbjct 115249 CTCTCGTCACGGT-CAGAAGGGTACCATTGGTATCA-CCT-ACCGACAGGAGGACATGCC 115193 Query 48621 CTTCGACAAGGACGGGGTGGTGCCCGACCTCATCATCAACCCCCACGCCTTTCCCTCCAG 48680 || ||| || || || ||||| | || || |||||||||||| |||| ||| | Sbjct 115192 TTTTACTCGGGAAGGTGTCGTTCCCGATTTGATTATTAACCCCCACGCCATTCCGTCCCG 115133 Query 48681 GATGACC 48687 |||||| Sbjct 115132 TATGACC 115126 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369503079417365