Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20nordicum_20[genbank_20GCA_5F000733025.2_202015-07-10]
915 sequences; 30,421,340 total letters
Query= NC_033780.1
Length=144510
Score E
Sequences producing significant alignments: (Bits) Value
seq36 140 3e-28
seq13 134 1e-26
seq37 109 5e-19
>seq36
Length=176580
Score = 140 bits (154), Expect = 3e-28
Identities = 171/230 (74%), Gaps = 4/230 (2%)
Strand=Plus/Minus
Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694
||| || || ||||| |||||||| || || ||| ||||||||| ||||| ||||| ||
Sbjct 98611 GCCACCACGAAGACGCAACACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCCGA 98552
Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754
|| || || |||| || |||||||| || ||||| || |||||||| ||||| | ||
Sbjct 98551 AAGAGTACGTCCGTCCTCCAGCTGCTTACCAGCGAAGATAAGGCGCTGCTGGTCAGGAGG 98492
Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCA-ACGA-CGACACAGTGTCGCTCGACTCC 41812
|| | |||||||||| ||| || ||| | | | ||| | |||||| |||||
Sbjct 98491 AATACCCTCCTTGTCCTGGATCTTGCTCTTGACATTATCGATA--GTGTCGGATGACTCG 98434
Query 41813 ACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
|| || | || || || || || || |||||||| ||||||||||||||
Sbjct 98433 ACTTCAAGTGTAATAGTCTTGCCAGTGAGCGTCTTCACGAAAATCTGCAT 98384
Score = 113 bits (124), Expect = 4e-20
Identities = 149/204 (73%), Gaps = 2/204 (1%)
Strand=Plus/Minus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || |||||||| | || || || || ||| |||||| |||||||| ||||| ||
Sbjct 98382 CCACCACGTAGACGAAGGACGAGGTGGAGGGTGGACTCCTTTTGAATGTTGTAGTCCGAA 98323
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|| || || |||| || ||||||||||| ||||| || || ||||| ||||| | |||
Sbjct 98322 AGAGTACGTCCGTCCTCAAGCTGCTTGCCTGCGAAGATGAGACGCTGCTGGTCGGGGGGG 98263
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814
| || |||||| ||| ||| || ||| |||| | | | ||| ||||| ||||| ||
Sbjct 98262 ATGCCCTCCTTATCCTGGATCTTCGACTT-AACGTTGTCGATAGTATCGCTGGACTCGAC 98204
Query 41815 CTCCACCGTTATCGTTTTACCCGT 41838
||| | || || || || || ||
Sbjct 98203 CTCAAGGGTGATGGTCTTGCCAGT 98180
>seq13
Length=236366
Score = 134 bits (148), Expect = 1e-26
Identities = 141/183 (77%), Gaps = 2/183 (1%)
Strand=Plus/Plus
Query 41673 CCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 41732
||||||| ||||| |||||| |||||||| | || ||||||||||| |||||||| |
Sbjct 24842 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGA 24901
Query 41733 TCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACG 41792
|||| ||||| ||||| | ||| | || |||||||||| ||| || ||| ||| |
Sbjct 24902 TCAGACGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGTCTT-GACGTTG 24960
Query 41793 AC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACG 41851
| | |||||||||||||| || || | || || || ||||||||||| ||||| |||
Sbjct 24961 TCGATGGTGTCGCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACG 25020
Query 41852 AAA 41854
|||
Sbjct 25021 AAA 25023
>seq37
Length=176155
Score = 109 bits (120), Expect = 5e-19
Identities = 107/138 (78%), Gaps = 0/138 (0%)
Strand=Plus/Plus
Query 41632 ACCGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTC 41691
||| || || || || || | || || || || || ||||||||| ||||| || ||
Sbjct 92792 ACCACCACCACGCAGGCGAAGGACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAATC 92851
Query 41692 GGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGC 41751
|| || ||||| |||| |||||||||||||||||||| ||||||||||| ||||| |
Sbjct 92852 CGAAAGAGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCAGG 92911
Query 41752 GGGAACGCTCTCCTTGTC 41769
||||| | |||||||||
Sbjct 92912 GGGAATACCCTCCTTGTC 92929
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 462298712398000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |