Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20nordicum_20[genbank_20GCA_5F000733025.2_202015-07-10] 915 sequences; 30,421,340 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq36 140 3e-28 seq13 134 1e-26 seq37 109 5e-19 >seq36 Length=176580 Score = 140 bits (154), Expect = 3e-28 Identities = 171/230 (74%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| || || ||||| |||||||| || || ||| ||||||||| ||||| ||||| || Sbjct 98611 GCCACCACGAAGACGCAACACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCCGA 98552 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 || || || |||| || |||||||| || ||||| || |||||||| ||||| | || Sbjct 98551 AAGAGTACGTCCGTCCTCCAGCTGCTTACCAGCGAAGATAAGGCGCTGCTGGTCAGGAGG 98492 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCA-ACGA-CGACACAGTGTCGCTCGACTCC 41812 || | |||||||||| ||| || ||| | | | ||| | |||||| ||||| Sbjct 98491 AATACCCTCCTTGTCCTGGATCTTGCTCTTGACATTATCGATA--GTGTCGGATGACTCG 98434 Query 41813 ACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || || | || || || || || || |||||||| |||||||||||||| Sbjct 98433 ACTTCAAGTGTAATAGTCTTGCCAGTGAGCGTCTTCACGAAAATCTGCAT 98384 Score = 113 bits (124), Expect = 4e-20 Identities = 149/204 (73%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || |||||||| | || || || || ||| |||||| |||||||| ||||| || Sbjct 98382 CCACCACGTAGACGAAGGACGAGGTGGAGGGTGGACTCCTTTTGAATGTTGTAGTCCGAA 98323 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || || || |||| || ||||||||||| ||||| || || ||||| ||||| | ||| Sbjct 98322 AGAGTACGTCCGTCCTCAAGCTGCTTGCCTGCGAAGATGAGACGCTGCTGGTCGGGGGGG 98263 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | || |||||| ||| ||| || ||| |||| | | | ||| ||||| ||||| || Sbjct 98262 ATGCCCTCCTTATCCTGGATCTTCGACTT-AACGTTGTCGATAGTATCGCTGGACTCGAC 98204 Query 41815 CTCCACCGTTATCGTTTTACCCGT 41838 ||| | || || || || || || Sbjct 98203 CTCAAGGGTGATGGTCTTGCCAGT 98180 >seq13 Length=236366 Score = 134 bits (148), Expect = 1e-26 Identities = 141/183 (77%), Gaps = 2/183 (1%) Strand=Plus/Plus Query 41673 CCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 41732 ||||||| ||||| |||||| |||||||| | || ||||||||||| |||||||| | Sbjct 24842 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGA 24901 Query 41733 TCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACG 41792 |||| ||||| ||||| | ||| | || |||||||||| ||| || ||| ||| | Sbjct 24902 TCAGACGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGTCTT-GACGTTG 24960 Query 41793 AC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACG 41851 | | |||||||||||||| || || | || || || ||||||||||| ||||| ||| Sbjct 24961 TCGATGGTGTCGCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACG 25020 Query 41852 AAA 41854 ||| Sbjct 25021 AAA 25023 >seq37 Length=176155 Score = 109 bits (120), Expect = 5e-19 Identities = 107/138 (78%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 41632 ACCGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTC 41691 ||| || || || || || | || || || || || ||||||||| ||||| || || Sbjct 92792 ACCACCACCACGCAGGCGAAGGACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAATC 92851 Query 41692 GGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGC 41751 || || ||||| |||| |||||||||||||||||||| ||||||||||| ||||| | Sbjct 92852 CGAAAGAGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCAGG 92911 Query 41752 GGGAACGCTCTCCTTGTC 41769 ||||| | ||||||||| Sbjct 92912 GGGAATACCCTCCTTGTC 92929 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462298712398000