Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20nordicum_20[genbank_20GCA_5F001278595.1_202015-09-03]
996 sequences; 30,844,022 total letters
Query= NC_001611.1
Length=185578
Score E
Sequences producing significant alignments: (Bits) Value
seq79 111 2e-19
seq46 104 3e-17
>seq79
Length=198956
Score = 111 bits (122), Expect = 2e-19
Identities = 117/154 (76%), Gaps = 0/154 (0%)
Strand=Plus/Minus
Query 24126 AACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAA 24185
|||| || ||| ||||| || ||| |||||||| || | | || | ||||||||
Sbjct 141341 AACAGCAGACAAGCGAAGTCAGTGTGGAGACCCTCATCACGAGAGATCAGCTCGTTGGAG 141282
Query 24186 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCA 24245
|| ||||| || ||||| ||||||||||| || ||||| || ||||| || ||||| |||
Sbjct 141281 AAAGTGAGACCAGGCATCAGGCCACGCTTCTTGAGCCAGAAGATGGAGGCGAATGAGCCA 141222
Query 24246 GAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAA 24279
|| ||||| || || || || || || |||||||
Sbjct 141221 GAGAAGAAGATACCCTCGACAGCGGCGAAGGCAA 141188
>seq46
Length=203589
Score = 104 bits (114), Expect = 3e-17
Identities = 549/870 (63%), Gaps = 20/870 (2%)
Strand=Plus/Minus
Query 53804 TGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGCGTACCAGTTTCAATC 53863
|| |||||||| ||||| || |||||||| || || || ||||| ||||||| ||| ||
Sbjct 124590 TGGTTACTCTTCTTGTTGCAAGCATCCTTGTAGAGCATAAATGGGTTACCAGTCTCAGTC 124531
Query 53864 TGGGATTCTATAATCGCTTTCCAGACGACACGAGCCTTTATTATAGATTTGTATCT---- 53919
|||| || | ||| || | ||||| ||||||| || | ||| |
Sbjct 124530 TGGGCCTCAAGAATGGCGTACCAGAGCTTCTGAGCCTTGATGGTC---TTGCGGCCACGG 124474
Query 53920 CTTTTCTCTTTCGTA--TAGTGTATACA--ATCGTTCAAACTCGTCTCCCCAAACATTGT 53975
| || || | |||| | | ||| | | |||| ||||| || || | ||||
Sbjct 124473 CCTTCCTGCT-CGTACTTCGCGTAGAGAGCATCG----AACTCATCGCCGTAGACATCAG 124419
Query 53976 CCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTT 54035
||| || || || | || || | | | ||| || |||| ||| || || |
Sbjct 124418 CCAGACCGGGGGCCTCGTTGGGGCAGAAGAGGGTCCAGTCACCGTTGGCCTCAACACGCT 124359
Query 54036 TCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGT 54095
|||| |||||||| || |||| | ||| || || || | | | | ||||| |
Sbjct 124358 TCATGAAGAGATCGGGGGTCCACAAAGCGTAGAAGAGGTCACGAGCGCGAACCTCCTCTT 124299
Query 54096 TTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGT 54155
| || ||||| |||||||||||| | | | ||| | |||||||| |||| ||
Sbjct 124298 TACCGTGGTTCTTCCGCAGATCGAGGAACTCGAAGACATCGGCGTGCCACGGCTCCAGGT 124239
Query 54156 ATATGGTCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTAT 54215
| |||| | | ||||| || ||||| || ||||| || | || | || ||||| |
Sbjct 124238 AGATGGCAAATGCACCAGGGCGCTTGTTACCACCCTGGTCGACATAGCGTGCAGTGTTGT 124179
Query 54216 TATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGC 54275
|| | || | || ||| |||| |||||| ||||| | || ||||| || || ||
Sbjct 124178 TAAACACACGCAGCATAGGAACAATACCGTTGGAGGAGCCGTTGGTTCCACCAATGTAAG 124119
Query 54276 TTCCACTGGCACGAATA--TTACTAATTGATAGACCTATCCCCCCTGCCATTTTAGAGAT 54333
|| | || |||||| | ||| ||||| || || || || | || |||||
Sbjct 124118 AACCGGTAGCGCGAATACGGTGGACATT--CAGACCGATACCACCAGCGGTCTTGGAGAT 124061
Query 54334 TAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAG 54393
| || ||| || | ||||| ||||| ||||| || || ||| | ||| | |
Sbjct 124060 CATGGCACATGTCTTGAGAGTATCGTAGATACCCTCAATGCTGTCAGCGCTCACATCGAC 124001
Query 54394 TAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGC 54453
|| || || | | ||| | | ||| | ||||| || | || ||||| ||
Sbjct 124000 CAGGAAGCAAGATGCAAGCTGGGGCTGGGGAGTAGCGGCATTGAACAGAGTGGGAGAGGC 123941
Query 54454 GTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCGATAGCTGAGTCTATATCCCA 54513
||| || || | || | || | | | ||| ||||| || || || ||||||
Sbjct 123940 GTGGGTGAAGTACTTCTGGGACATCAAGTGGTATGTCTCAATGGCCCTCTCGATATCCTC 123881
Query 54514 TTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTT 54573
|| ||||| || || |||||||| | || ||||||||| | ||| | | |||
Sbjct 123880 GCCGTGGATTCCGACAGCAACACGCATCAGCAAGTGCTGAGGACGCTCAGCAACATTGCC 123821
Query 54574 GTTTATTTTCAGCAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAA 54633
||| || || | ||| || || | || || || || || ||||||| ||
Sbjct 123820 GTTAATGCGAAGAAGGTATGAACGCTCGAGGGTCTTGAATCCGAAGAAGTTGTAGTTGAA 123761
Query 54634 GTCTCGTTCGTAAATAATAACTGAGTTGAG 54663
||| || ||||| | ||| | ||||||||
Sbjct 123760 GTCACGGTCGTACACAATGGCCGAGTTGAG 123731
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 593714208166080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |