Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20nordicum_20[genbank_20GCA_5F001278595.1_202015-09-03] 996 sequences; 30,844,022 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq79 111 2e-19 seq46 104 3e-17 >seq79 Length=198956 Score = 111 bits (122), Expect = 2e-19 Identities = 117/154 (76%), Gaps = 0/154 (0%) Strand=Plus/Minus Query 24126 AACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAA 24185 |||| || ||| ||||| || ||| |||||||| || | | || | |||||||| Sbjct 141341 AACAGCAGACAAGCGAAGTCAGTGTGGAGACCCTCATCACGAGAGATCAGCTCGTTGGAG 141282 Query 24186 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCA 24245 || ||||| || ||||| ||||||||||| || ||||| || ||||| || ||||| ||| Sbjct 141281 AAAGTGAGACCAGGCATCAGGCCACGCTTCTTGAGCCAGAAGATGGAGGCGAATGAGCCA 141222 Query 24246 GAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAA 24279 || ||||| || || || || || || ||||||| Sbjct 141221 GAGAAGAAGATACCCTCGACAGCGGCGAAGGCAA 141188 >seq46 Length=203589 Score = 104 bits (114), Expect = 3e-17 Identities = 549/870 (63%), Gaps = 20/870 (2%) Strand=Plus/Minus Query 53804 TGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGCGTACCAGTTTCAATC 53863 || |||||||| ||||| || |||||||| || || || ||||| ||||||| ||| || Sbjct 124590 TGGTTACTCTTCTTGTTGCAAGCATCCTTGTAGAGCATAAATGGGTTACCAGTCTCAGTC 124531 Query 53864 TGGGATTCTATAATCGCTTTCCAGACGACACGAGCCTTTATTATAGATTTGTATCT---- 53919 |||| || | ||| || | ||||| ||||||| || | ||| | Sbjct 124530 TGGGCCTCAAGAATGGCGTACCAGAGCTTCTGAGCCTTGATGGTC---TTGCGGCCACGG 124474 Query 53920 CTTTTCTCTTTCGTA--TAGTGTATACA--ATCGTTCAAACTCGTCTCCCCAAACATTGT 53975 | || || | |||| | | ||| | | |||| ||||| || || | |||| Sbjct 124473 CCTTCCTGCT-CGTACTTCGCGTAGAGAGCATCG----AACTCATCGCCGTAGACATCAG 124419 Query 53976 CCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTT 54035 ||| || || || | || || | | | ||| || |||| ||| || || | Sbjct 124418 CCAGACCGGGGGCCTCGTTGGGGCAGAAGAGGGTCCAGTCACCGTTGGCCTCAACACGCT 124359 Query 54036 TCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGT 54095 |||| |||||||| || |||| | ||| || || || | | | | ||||| | Sbjct 124358 TCATGAAGAGATCGGGGGTCCACAAAGCGTAGAAGAGGTCACGAGCGCGAACCTCCTCTT 124299 Query 54096 TTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGT 54155 | || ||||| |||||||||||| | | | ||| | |||||||| |||| || Sbjct 124298 TACCGTGGTTCTTCCGCAGATCGAGGAACTCGAAGACATCGGCGTGCCACGGCTCCAGGT 124239 Query 54156 ATATGGTCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTAT 54215 | |||| | | ||||| || ||||| || ||||| || | || | || ||||| | Sbjct 124238 AGATGGCAAATGCACCAGGGCGCTTGTTACCACCCTGGTCGACATAGCGTGCAGTGTTGT 124179 Query 54216 TATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGC 54275 || | || | || ||| |||| |||||| ||||| | || ||||| || || || Sbjct 124178 TAAACACACGCAGCATAGGAACAATACCGTTGGAGGAGCCGTTGGTTCCACCAATGTAAG 124119 Query 54276 TTCCACTGGCACGAATA--TTACTAATTGATAGACCTATCCCCCCTGCCATTTTAGAGAT 54333 || | || |||||| | ||| ||||| || || || || | || ||||| Sbjct 124118 AACCGGTAGCGCGAATACGGTGGACATT--CAGACCGATACCACCAGCGGTCTTGGAGAT 124061 Query 54334 TAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAG 54393 | || ||| || | ||||| ||||| ||||| || || ||| | ||| | | Sbjct 124060 CATGGCACATGTCTTGAGAGTATCGTAGATACCCTCAATGCTGTCAGCGCTCACATCGAC 124001 Query 54394 TAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGC 54453 || || || | | ||| | | ||| | ||||| || | || ||||| || Sbjct 124000 CAGGAAGCAAGATGCAAGCTGGGGCTGGGGAGTAGCGGCATTGAACAGAGTGGGAGAGGC 123941 Query 54454 GTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCGATAGCTGAGTCTATATCCCA 54513 ||| || || | || | || | | | ||| ||||| || || || |||||| Sbjct 123940 GTGGGTGAAGTACTTCTGGGACATCAAGTGGTATGTCTCAATGGCCCTCTCGATATCCTC 123881 Query 54514 TTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTT 54573 || ||||| || || |||||||| | || ||||||||| | ||| | | ||| Sbjct 123880 GCCGTGGATTCCGACAGCAACACGCATCAGCAAGTGCTGAGGACGCTCAGCAACATTGCC 123821 Query 54574 GTTTATTTTCAGCAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAA 54633 ||| || || | ||| || || | || || || || || ||||||| || Sbjct 123820 GTTAATGCGAAGAAGGTATGAACGCTCGAGGGTCTTGAATCCGAAGAAGTTGTAGTTGAA 123761 Query 54634 GTCTCGTTCGTAAATAATAACTGAGTTGAG 54663 ||| || ||||| | ||| | |||||||| Sbjct 123760 GTCACGGTCGTACACAATGGCCGAGTTGAG 123731 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593714208166080