Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20nordicum_20[genbank_20GCA_5F001278595.1_202015-09-03]
996 sequences; 30,844,022 total letters
Query= NC_001875.2
Length=131995
Score E
Sequences producing significant alignments: (Bits) Value
seq601 91.5 1e-13
>seq601
Length=120753
Score = 91.5 bits (100), Expect = 1e-13
Identities = 146/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 20966 CACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTC 21025
||||| || | |||||||||||| || ||||| ||||||| || || | |||||||
Sbjct 55608 CACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTACGTCCGTCCTC 55667
Query 21026 CAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGC 21085
|||||| || || || | ||||| | ||||||||| || | || ||||||||
Sbjct 55668 CAGCTGCTTACCAGCGAAGATAAGGCGCTGCTGGTCAGGAGGAATACCCTCCTTGTCCTG 55727
Query 21086 GATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTT 21145
|||||| || || | ||| ||| || | ||| ||| | ||||| |||||
Sbjct 55728 GATCTTGCTCTTGACATTATCGATAGTGTCGGATGACTCGACTTCAAGTGTAATAGTCTT 55787
Query 21146 GCCGGTTAACGTTTTGACAAATATTTGCAT 21175
||| || | ||| || || || || |||||
Sbjct 55788 GCCAGTGAGCGTCTTCACGAAAATCTGCAT 55817
Score = 91.5 bits (100), Expect = 1e-13
Identities = 124/173 (72%), Gaps = 0/173 (0%)
Strand=Plus/Plus
Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038
|||||||||||||||||||| ||||||| || || | ||||||| ||||| |||||
Sbjct 56077 GTGGACTCCTTTTGAATGTTGTAGTCCGAAAGAGTACGTCCGTCCTCAAGCTGCTTGCCT 56136
Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098
|| | || || | ||||||||| ||| | ||| ||||| || |||||| ||
Sbjct 56137 GCGAAGATGAGACGCTGCTGGTCGGGGGGGATGCCCTCCTTATCCTGGATCTTCGACTTA 56196
Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGT 21151
|| | | ||| |||||| | || ||| || | || ||||| || |||||
Sbjct 56197 ACATTGTCGATAGTATCGCTGGACTCAACCTCAAGAGTGATGGTTTTCCCGGT 56249
Score = 91.5 bits (100), Expect = 1e-13
Identities = 133/188 (71%), Gaps = 0/188 (0%)
Strand=Plus/Plus
Query 20964 AGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCC 21023
||||| | || | ||| |||||||| || ||||| ||||||| || || | |||||
Sbjct 56348 AGCACGAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTACGTCCGTCC 56407
Query 21024 TCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCG 21083
|| ||||| ||||| || | || || | ||||||||| ||| | ||| ||||| ||
Sbjct 56408 TCAAGCTGCTTGCCTGCGAAGATGAGACGCTGCTGGTCGGGGGGGATGCCCTCCTTATCC 56467
Query 21084 GCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTC 21143
|||||| || || | | ||| |||||| | || ||| || | ||| ||||||
Sbjct 56468 TGGATCTTCGACTTAACGTTGTCGATAGTATCGCTGGACTCGACCTCAAGGGTGATGGTC 56527
Query 21144 TTGCCGGT 21151
||||| ||
Sbjct 56528 TTGCCAGT 56535
Score = 86.0 bits (94), Expect = 5e-12
Identities = 137/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038
|||||||||||||||||||| ||||||| || || | |||| || ||||| |||||
Sbjct 55849 GTGGACTCCTTTTGAATGTTGTAGTCCGAAAGAGTACGTCCGTCTTCAAGCTGCTTGCCT 55908
Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098
|| | || || | ||||||||| ||| | ||| ||||| || ||||| |||
Sbjct 55909 GCGAAGATGAGACGCTGCTGGTCGGGGGGAATGCCCTCCTTATCTTGAATCTTGGACTTC 55968
Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158
|| | ||| || || | ||| ||| | ||||| |||||||| || | |||
Sbjct 55969 ACATTATCGATGGTGTCGGATGACTCGACTTCAAGTGTAATAGTCTTGCCAGTGAGCGTC 56028
Query 21159 TTGACAAATATTTGCAT 21175
|| || || || |||||
Sbjct 56029 TTCACGAAAATCTGCAT 56045
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 422254074301136
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |