Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20nordicum_20[genbank_20GCA_5F001278595.1_202015-09-03] 996 sequences; 30,844,022 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq183 120 3e-22 seq601 116 3e-21 seq243 84.2 2e-11 >seq183 Length=38727 Score = 120 bits (132), Expect = 3e-22 Identities = 138/182 (76%), Gaps = 4/182 (2%) Strand=Plus/Plus Query 118551 TTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATG 118610 || || |||||||| ||||||| ||||| |||||||||||| ||||| ||| |||| Sbjct 24775 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGATC 24834 Query 118611 AGACGCTGCTGATCGGGAGGTATGCCCTCCTTGT-CTGTAATTTTTTGT-TTAACCTGTT 118668 ||||||||||| ||||| || ||||||||||||| ||| | | || || || || | | Sbjct 24835 AGACGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGA--TCTTGGTCTTGACGTTGT 24892 Query 118669 CGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAA 118728 ||| |||||| | |||||| |||| ||| | || || || ||||| || || || | Sbjct 24893 CGATGGTGTCGCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGA 24952 Query 118729 AA 118730 || Sbjct 24953 AA 24954 >seq601 Length=120753 Score = 116 bits (128), Expect = 3e-21 Identities = 148/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594 ||||| || ||||| |||||||||||||| || | ||| || || || ||||| Sbjct 55842 GTGGAGGGTGGACTCCTTTTGAATGTTGTAGTCCGAAAGAGTACGTCCGTCTTCAAGCTG 55901 Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTT 118654 || || ||| |||||||||||||||| ||||| || ||||||||||| ||| ||| || Sbjct 55902 CTTGCCTGCGAAGATGAGACGCTGCTGGTCGGGGGGAATGCCCTCCTTATCTTGAATCTT 55961 Query 118655 TTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGT 118714 || || | |||| |||||| | |||||| || | || | || ||||| || Sbjct 55962 GGACTTCACATTATCGATGGTGTCGGATGACTCGACTTCAAGTGTAATAGTCTTGCCAGT 56021 Query 118715 CAGAGTTTTTACAAAAATCTGCAT 118738 || || || || ||||||||||| Sbjct 56022 GAGCGTCTTCACGAAAATCTGCAT 56045 Score = 105 bits (116), Expect = 6e-18 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 118526 CAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATC 118585 |||||||| ||||| || ||||| || || |||||||| || | ||| || || Sbjct 55605 CAACACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTACGTCCGTC 55664 Query 118586 CTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645 ||| ||||| || |||||| |||| || |||||||| || ||||| || ||||||||||| Sbjct 55665 CTCCAGCTGCTTACCAGCGAAGATAAGGCGCTGCTGGTCAGGAGGAATACCCTCCTTGTC 55724 Query 118646 TGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGT 118705 || || || || | |||| ||||| | |||||| || | || | || Sbjct 55725 CTGGATCTTGCTCTTGACATTATCGATAGTGTCGGATGACTCGACTTCAAGTGTAATAGT 55784 Query 118706 TTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 ||||| || || || || || ||||||||||| Sbjct 55785 CTTGCCAGTGAGCGTCTTCACGAAAATCTGCAT 55817 Score = 104 bits (114), Expect = 2e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594 ||||| || ||||| |||||||||||||| || | ||| || ||||| ||||| Sbjct 56070 GTGGAGGGTGGACTCCTTTTGAATGTTGTAGTCCGAAAGAGTACGTCCGTCCTCAAGCTG 56129 Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTT 118654 || || ||| |||||||||||||||| ||||| || ||||||||||| || || || Sbjct 56130 CTTGCCTGCGAAGATGAGACGCTGCTGGTCGGGGGGGATGCCCTCCTTATCCTGGATCTT 56189 Query 118655 TTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGT 118714 ||||| | |||| || || || ||| ||||| | || | ||||| ||||| Sbjct 56190 CGACTTAACATTGTCGATAGTATCGCTGGACTCAACCTCAAGAGTGATGGTTTTCCCGGT 56249 Query 118715 CAGAGTTTTTAC 118726 ||| || || || Sbjct 56250 CAGGGTCTTAAC 56261 Score = 96.9 bits (106), Expect = 3e-15 Identities = 133/186 (72%), Gaps = 0/186 (0%) Strand=Plus/Plus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 ||| | ||||| |||||||| || || |||||||| || | ||| || ||||| Sbjct 56350 CACGAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTACGTCCGTCCTC 56409 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648 ||||| || || ||| |||||||||||||||| ||||| || ||||||||||| || Sbjct 56410 AAGCTGCTTGCCTGCGAAGATGAGACGCTGCTGGTCGGGGGGGATGCCCTCCTTATCCTG 56469 Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708 || || ||||| | |||| || || || ||||||||| | ||| | || || Sbjct 56470 GATCTTCGACTTAACGTTGTCGATAGTATCGCTGGACTCGACCTCAAGGGTGATGGTCTT 56529 Query 118709 GCCGGT 118714 ||| || Sbjct 56530 GCCAGT 56535 >seq243 Length=29033 Score = 84.2 bits (92), Expect = 2e-11 Identities = 82/106 (77%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 || ||||| || || ||||||||||| | |||||| ||||||||||| || || Sbjct 22814 GTCGACTCCTTCTGGATGTTGTAATCCGAAAGAGTGCGGCCGTCCTCGAGCTGCTTGCCG 22755 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTG 118647 ||| |||| || |||||||| || || || || ||||||||||||| Sbjct 22754 GCGAAGATCAGGCGCTGCTGGTCAGGGGGAATACCCTCCTTGTCTG 22709 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433825133841232