Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20nordicum_20[genbank_20GCA_5F001278595.1_202015-09-03] 996 sequences; 30,844,022 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq601 111 2e-19 seq183 105 8e-18 >seq601 Length=120753 Score = 111 bits (122), Expect = 2e-19 Identities = 154/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027 ||||||||||| || | ||| |||||| || || ||||| || | ||||| || | Sbjct 55602 ACGCAACACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTACGTCC 55661 Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087 ||| || ||||||||||||||||| || || ||||||||||| | || | | |||||| Sbjct 55662 GTCCTCCAGCTGCTTACCAGCGAAGATAAGGCGCTGCTGGTCAGGAGGAATACCCTCCTT 55721 Query 43088 GTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGAT 43147 |||| ||| || |||| | | | |||||| || || || || | || || Sbjct 55722 GTCCTGGATCTTGCTCTTGACATTATCGATAGTGTCGGATGACTCGACTTCAAGTGTAAT 55781 Query 43148 GGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || ||||| || |||||||| || || || ||||| Sbjct 55782 AGTCTTGCCAGTGAGCGTCTTCACGAAAATCTGCAT 55817 Score = 104 bits (114), Expect = 3e-17 Identities = 131/180 (73%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||||||||| ||||| || | ||||| || |||| || |||||||| || ||||| Sbjct 56082 CTCCTTTTGAATGTTGTAGTCCGAAAGAGTACGTCCGTCCTCAAGCTGCTTGCCTGCGAA 56141 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| ||||||||||||| || | || |||||| ||| ||| || || | | Sbjct 56142 GATGAGACGCTGCTGGTCGGGGGGGATGCCCTCCTTATCCTGGATCTTCGACTTAACATT 56201 Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | || ||||| || || || || | ||||||||||| || || || ||||| || Sbjct 56202 GTCGATAGTATCGCTGGACTCAACCTCAAGAGTGATGGTTTTCCCGGTCAGGGTCTTAAC 56261 Score = 98.7 bits (108), Expect = 1e-15 Identities = 139/193 (72%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||||||||| ||||| || | ||||| || |||| || |||||||| || ||||| Sbjct 55854 CTCCTTTTGAATGTTGTAGTCCGAAAGAGTACGTCCGTCTTCAAGCTGCTTGCCTGCGAA 55913 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 43110 ||||| ||||||||||||| || | || |||||| | | ||| | || | || | Sbjct 55914 GATGAGACGCTGCTGGTCGGGGGGAATGCCCTCCTTAT-CTTGAATCTTGGACTTCACAT 55972 Query 43111 TCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 43170 | | | |||||| || || || || | || || || ||||| || |||||||| | Sbjct 55973 TATCGATGGTGTCGGATGACTCGACTTCAAGTGTAATAGTCTTGCCAGTGAGCGTCTTCA 56032 Query 43171 CAAAGATTTGCAT 43183 | || || ||||| Sbjct 56033 CGAAAATCTGCAT 56045 Score = 91.5 bits (100), Expect = 2e-13 Identities = 123/169 (73%), Gaps = 2/169 (1%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || | ||||| || |||| || |||||||| || ||||| Sbjct 56368 CTCCTTCTGGATGTTGTAGTCCGAAAGAGTACGTCCGTCCTCAAGCTGCTTGCCTGCGAA 56427 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| ||||||||||||| || | || |||||| ||| || | || | | | ||| Sbjct 56428 GATGAGACGCTGCTGGTCGGGGGGGATGCCCTCCTTATCC-TGGATCTTCGACTTAACGT 56486 Query 43112 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGT 43159 | | | || ||||| || || || || | |||||||| ||||| || Sbjct 56487 TGTCGATAGTATCGCTGGACTCGACCTCAAGGGTGATGGTCTTGCCAGT 56535 >seq183 Length=38727 Score = 105 bits (116), Expect = 8e-18 Identities = 134/182 (74%), Gaps = 2/182 (1%) Strand=Plus/Plus Query 42994 CCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATA 43053 |||| || || ||||| || ||| || || | || || |||||||| || ||||| | Sbjct 24773 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGA 24832 Query 43054 TGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG 43113 | || ||||||||||||| || | || |||||||||| ||| || |||| ||| | Sbjct 24833 TCAGACGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGTCTTGA-CGTTG 24891 Query 43114 -CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 43172 | | ||||||||||| || ||||||| || ||||| || ||||| || ||||| || Sbjct 24892 TCGATGGTGTCGCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACG 24951 Query 43173 AA 43174 || Sbjct 24952 AA 24953 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571810480870880