Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20nordicum_20[genbank_20GCA_5F001278595.1_202015-09-03]
996 sequences; 30,844,022 total letters
Query= NC_002687.1
Length=335593
Score E
Sequences producing significant alignments: (Bits) Value
seq307 104 5e-17
seq46 84.2 5e-11
>seq307
Length=19340
Score = 104 bits (114), Expect = 5e-17
Identities = 132/180 (73%), Gaps = 4/180 (2%)
Strand=Plus/Minus
Query 254202 TGTCCGCCTTTCAAGCTCGTGATCCTGGACGAGGCGGACACCATGACGGCCGACGCGCAG 254261
|| || || |||||| || | ||||| |||||||| |||| |||||| ||||| |||
Sbjct 14453 TGCCCACCATTCAAGATCATCATCCTCGACGAGGCAGACAGTATGACGCAAGACGCACAG 14394
Query 254262 TCCGCCCTCCGCCGAACGATGGAGAC--GCACTCCGTTGTGACGCGTTTTTGCCTGGTGT 254319
||||| || ||||| ||||||||||| || || | | ||||| || || || || |
Sbjct 14393 TCCGCTCTGCGCCGCACGATGGAGACATACAGTCGG--ATCACGCGGTTCTGTCTTGTCT 14336
Query 254320 GCAACTACGTGTCGAAGATCATCGCCCCGCTGGCTTCTCGGTGCGCCAAGTTTCGATTCA 254379
| || ||||| || || |||| ||||| ||| ||| ||| |||||| |||||||
Sbjct 14335 GTAATTACGTCACGCGCATTATCGAGCCGCTCGCTAGTCGATGCAGCAAGTTCCGATTCA 14276
>seq46
Length=203589
Score = 84.2 bits (92), Expect = 5e-11
Identities = 115/161 (71%), Gaps = 0/161 (0%)
Strand=Plus/Plus
Query 249277 TTCGCCATGTATTTGGAAGTGTGGCACGCCGATATATTGGAGTTCCTGGACTTGAAAAAG 249336
|| ||||| || |||| ||||||||||||| | || |||||||| || || |||
Sbjct 124229 TTTGCCATCTACCTGGAGCCGTGGCACGCCGATGTCTTCGAGTTCCTCGATCTGCGGAAG 124288
Query 249337 AACAACGGCAACGAGCTCATGAGAGCGCGTGACCTCTTCTACGGCCTGTGGGTCTCCGAC 249396
||| |||| || ||| | | || |||||||||||||||| ||||| | ||||
Sbjct 124289 AACCACGGTAAAGAGGAGGTTCGCGCTCGTGACCTCTTCTACGCTTTGTGGACCCCCGAT 124348
Query 249397 TTGTTCATGCGCCGCGTCAAGGCCGACGGCGATTGGACGCT 249437
| |||||| || || ||||| |||| || ||||| ||
Sbjct 124349 CTCTTCATGAAGCGTGTTGAGGCCAACGGTGACTGGACCCT 124389
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1073752697398528
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |