Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20nordicum_20[genbank_20GCA_5F001278595.1_202015-09-03] 996 sequences; 30,844,022 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq46 282 4e-71 seq79 122 8e-23 seq601 95.1 1e-14 seq183 86.0 6e-12 >seq46 Length=203589 Score = 282 bits (312), Expect = 4e-71 Identities = 646/963 (67%), Gaps = 12/963 (1%) Strand=Plus/Minus Query 23020 GGCGATCGAGGCAAGATTGCATACGGCCACCTCGTCTTTGGACGTGTACTCTACAATTTC 23079 ||||| || || || ||||| || |||||||| || || ||||||| ||||| || Sbjct 124690 GGCGAGAGAAGCCAGGTTGCAGACAGCCACCTCATCAGGGGCACTGTACTCGACAATCTC 124631 Query 23080 GGTACATAGATTG---CTACACTTTATCGTGCCCAAATTGCTCTGGTTGCTTTTTCGATT 23136 || || || ||| |||| || || |||| || ||||||| || || || Sbjct 124630 AGTGCACAGGTTGGAGCTACGA---ATAGTACCCAGGTTCTTCTGGTTACTCTTCTTGTT 124574 Query 23137 GCACGAATCCTTGTAGAGCATGTACGGCGTGCCCGTCTCGACCTGCGACTCGATGATCGC 23196 ||| | ||||||||||||||| | || | || ||||| ||| | ||| | || || Sbjct 124573 GCAAGCATCCTTGTAGAGCATAAATGGGTTACCAGTCTCAGTCTGGGCCTCAAGAATGGC 124514 Query 23197 TCGCCACATAGTCTGAGCGTGAACACGTCGCACGTAC-CTGCCTTCTTCCTCGTACTTTT 23255 ||| | ||||||| | | ||| || | | |||||| | ||||||||| Sbjct 124513 GTACCAGAGCTTCTGAGCCTTGATG-GTCTTGCGGCCACGGCCTTCCTGCTCGTACTTCG 124455 Query 23256 GGTACAACGCGTCAAATTCGGCACCGTA-ACAGTCGGCCAGGCCGGGCGATTGCATCGGA 23314 ||| | || || || || | ||||| ||| || ||||| ||||| | | | || Sbjct 124454 CGTAGAGAGCATCGAACTCATCGCCGTAGACA-TCAGCCAGACCGGGGGCCTCGTTGGGG 124396 Query 23315 CACATGAGACTCCACATTGAGTCATTTTCAACGCGTCTCATAAAAAGATCCGGTATCCAT 23374 || | ||| |||| || ||||| || |||| || ||||| || |||| Sbjct 124395 CAGAAGAGGGTCCAGTCACCGTTGGCCTCAACACGCTTCATGAAGAGATCGGGGGTCCAC 124336 Query 23375 AGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCC 23434 | ||||||||| || || || ||||| ||||||||||| ||| |||||| || ||| Sbjct 124335 AAAGCGTAGAAGAGGTCACGAGCGCGAACCTCCTCTTTACCGTGGTTCTTCCGCAGATCG 124276 Query 23435 AAAAAGTCCAACACGTCCGCATGCCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTC 23494 | || || || || || || ||||||||||| ||||| | |||||| || || || | | Sbjct 124275 AGGAACTCGAAGACATCGGCGTGCCACGGCTCCAGGTAGATGGCAAATGCACCAGGGCGC 124216 Query 23495 TTATTGCCGCCCTGATCGACGTAACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACG 23554 || || || ||||| ||||| || || || |||||||| |||| | ||||| || || Sbjct 124215 TTGTTACCACCCTGGTCGACATAGCGTGCAGTGTTGTTAAACACACGCAGCATAGGAACA 124156 Query 23555 AGACCGTTGGACGCGCCGCCTACGCCCGCCACACT-CGAACCTTTTGCTCGAACGTTGTG 23613 | ||||||||| | |||| | || ||| | ||||| | || |||| ||| Sbjct 124155 ATACCGTTGGAGGAGCCG-TTGGTTCCACCAATGTAAGAACCGGTAGCGCGAATACGGTG 124097 Query 23614 AACGTGGAAACCTATGCCTCCGCCCGATTTCGATATCATCGCGCATTGTTTCAGAGTGTC 23673 || | | ||| || || || | | || || ||||| || ||| || ||||| || Sbjct 124096 GACATTCAGACCGATACCACCAGCGGTCTTGGAGATCATGGCACATGTCTTGAGAGTATC 124037 Query 23674 GTAGATGCCCTCGATGCTGTCCTCTTTGGTCGCGACCAAGAAACACGAAGACATTTGCGC 23733 |||||| ||||| |||||||| | | |||||| ||| || || | | || | Sbjct 124036 GTAGATACCCTCAATGCTGTCAGCGCTCACATCGACCAGGAAGCAAGATGCAAGCTGGGG 123977 Query 23734 TTTGGGCGTAGCGGCCGAGAACAGTGTCGGGCTGGCGTGCGTAAAGTATCCATTCGACAT 23793 | ||| |||||||| |||||| || || |||||| || ||||| | ||||| Sbjct 123976 CTGGGGAGTAGCGGCATTGAACAGAGTGGGAGAGGCGTGGGTGAAGTACTTCTGGGACAT 123917 Query 23794 TAGATTGTACGTGTCGATGGCGGCATCAATGTCCTCTCCGTGTATACCGATGGCGACGCG 23853 | | ||| || || ||||| || || ||||| ||||| || |||| || || || Sbjct 123916 CAAGTGGTATGTCTCAATGGCCCTCTCGATATCCTCGCCGTGGATTCCGACAGCAACACG 123857 Query 23854 CATCATCATGTATTGAGGTCTCTCGACCGTGACGCCGTTAATTTTGAACAGATATGAACG 23913 ||||| || || ||||| | ||| | ||||||||| | || |||||||| Sbjct 123856 CATCAGCAAGTGCTGAGGACGCTCAGCAACATTGCCGTTAATGCGAAGAAGGTATGAACG 123797 Query 23914 TTGCATCGTTTTAAATCCAAAATAGTCATAGTTAAAGTCACGATCGTGCACTATGGCCGA 23973 | | || || ||||| || ||| ||||| |||||||| |||| ||| |||||||| Sbjct 123796 CTCGAGGGTCTTGAATCCGAAGAAGTTGTAGTTGAAGTCACGGTCGTACACAATGGCCGA 123737 Query 23974 ATT 23976 || Sbjct 123736 GTT 123734 >seq79 Length=198956 Score = 122 bits (134), Expect = 8e-23 Identities = 169/234 (72%), Gaps = 2/234 (1%) Strand=Plus/Plus Query 57909 ATCGCCAAGAAGGCAGAGTGGTCAATCAAATGGAT-AAAAAGCGCCACGGCCACGTTCGC 57967 || ||||||||||| | ||| | |||| ||||| || | ||| | | | || ||||| Sbjct 141118 ATTGCCAAGAAGGCCAACTGGGCCCTCAAGTGGATCAACGACCGCGA-GTCAACCTTCGC 141176 Query 57968 CGAGAGGCTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGC 58027 | | || | || |||||||| ||||| ||||| ||||| || ||| || || | Sbjct 141177 TTCGCGTCTGGTTGCCTTCGCCGCTGTCGAGGGTATCTTCTTCTCTGGCTCATTCGCCTC 141236 Query 58028 AATATTTTGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGAT 58087 || || ||| | ||||| || ||||||||||| || || || || ||||||| |||| Sbjct 141237 CATCTTCTGGCTCAAGAAGCGTGGCCTGATGCCTGGTCTCACTTTCTCCAACGAGCTGAT 141296 Query 58088 ATCGCGCGACGAGGGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACAT 58141 || || || ||||||||||| ||||| || || || || ||| ||| ||||| Sbjct 141297 CTCTCGTGATGAGGGTCTCCACACTGACTTCGCTTGTCTGCTGTTCTCCCACAT 141350 >seq601 Length=120753 Score = 95.1 bits (104), Expect = 1e-14 Identities = 150/212 (71%), Gaps = 6/212 (3%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| |||||||| ||||| || || ||||| || || || | || || || | ||| Sbjct 55817 ATGCAGATTTTCGTGAAGACGCTCACTGGCAAGACTATTACACTTGAAGTCGAGTCATCC 55758 Query 31253 GACAGTGTCGAAACGGTCAAACAGAG-AATAGC--GGACAAGGAAGGCGTGCCGCCCGAC 31309 |||| | |||| | ||||| ||| || | | ||||||||| || | || || ||| Sbjct 55757 GACACTATCGATAATGTCAA---GAGCAAGATCCAGGACAAGGAGGGTATTCCTCCTGAC 55701 Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTAT 31369 |||||||| || || |||||||| || ||| |||| ||| ||| | || || Sbjct 55700 CAGCAGCGCCTTATCTTCGCTGGTAAGCAGCTGGAGGACGGACGTACTCTTTCGGACTAC 55641 Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGT 31401 ||||| || || || || ||||| || ||||| Sbjct 55640 AACATCCAGAAGGAGTCCACTCTCCACCTGGT 55609 Score = 93.3 bits (102), Expect = 4e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| |||||||| ||||| || || ||||| || || || | || || || | ||| Sbjct 56045 ATGCAGATTTTCGTGAAGACGCTCACTGGCAAGACTATTACACTTGAAGTCGAGTCATCC 55986 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | || || | || || ||||| ||| | || ||||||||| Sbjct 55985 GACACCATCGATAATGTGAAGTCCAAGATTCAAGATAAGGAGGGCATTCCCCCCGACCAG 55926 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 |||||||| || ||||| ||||| ||| | |||||| ||| | || || ||| Sbjct 55925 CAGCGTCTCATCTTCGCAGGCAAGCAGCTTGAAGACGGACGTACTCTTTCGGACTACAAC 55866 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 |||||||| || || || || || || || ||| | || | || |||| Sbjct 55865 ATTCAAAAGGAGTCCACCCTCCACCTCGTCCTTCGTCTACGTGGTGGTA 55817 Score = 89.7 bits (98), Expect = 5e-13 Identities = 151/219 (69%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 31203 TCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGTCG 31262 |||| ||||| ||||| || ||||| ||||| | || ||||| | ||| | | ||| Sbjct 56263 TCGTTAAGACCCTGACCGGGAAAACCATCACTCTTGAGGTTGAGTCCAGCGATACTATCG 56204 Query 31263 AAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCTAA 31322 | | || || || || ||| ||||| ||| | || ||||||||||||||||| | Sbjct 56203 ACAATGTTAAGTCGAAGATCCAGGATAAGGAGGGCATCCCCCCCGACCAGCAGCGTCTCA 56144 Query 31323 TATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAAAAG 31382 | ||||| ||||| ||| | || ||| ||| | || || ||||||||||| | Sbjct 56143 TCTTCGCAGGCAAGCAGCTTGAGGACGGACGTACTCTTTCGGACTACAACATTCAAAAGG 56084 Query 31383 AATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 | || || || || || || ||| | || | || |||| Sbjct 56083 AGTCCACCCTCCACCTCGTCCTTCGTCTACGTGGTGGTA 56045 >seq183 Length=38727 Score = 86.0 bits (94), Expect = 6e-12 Identities = 129/181 (71%), Gaps = 2/181 (1%) Strand=Plus/Minus Query 31201 TTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGT 31260 |||||| ||||| ||||| || || || || ||| |||| || || || ||||| | Sbjct 24954 TTTCGTCAAGACCCTGACGGGTAAGACCATTACCCTCGATGTCGAGTCGAGCGACACCAT 24895 Query 31261 CGAAACGGTCAA-ACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTC 31319 ||| | ||||| || ||| | ||||||||| ||| | || |||||||||||||||| Sbjct 24894 CGACAACGTCAAGACCAAGA-TCCAGGACAAGGAGGGCATCCCCCCCGACCAGCAGCGTC 24836 Query 31320 TAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAA 31379 | || ||||| || || ||| | || || || ||||||| || ||||| || | Sbjct 24835 TGATCTTCGCCGGAAAGCAGCTCGAGGATGGCCGCACCCTGAGCGACTACAACATCCAGA 24776 Query 31380 A 31380 | Sbjct 24775 A 24775 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445760850208320