Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20nordicum_20[genbank_20GCA_5F001278595.1_202015-09-03] 996 sequences; 30,844,022 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq46 104 5e-17 seq79 100 6e-16 >seq46 Length=203589 Score = 104 bits (114), Expect = 5e-17 Identities = 176/255 (69%), Gaps = 0/255 (0%) Strand=Plus/Minus Query 94786 CCGAGTCCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTATCATAAATACCC 94845 |||| || ||||| ||||||||||| || || ||| |||||||| || |||||| Sbjct 124086 CCGATACCACCAGCGGTCTTGGAGATCATGGCACATGTCTTGAGAGTATCGTAGATACCC 124027 Query 94846 TCAATGCTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGGGGTGTGACTGTT 94905 |||||||| ||| | | | | |||||||| || | ||| ||||| | || Sbjct 124026 TCAATGCTGTCAGCGCTCACATCGACCAGGAAGCAAGATGCAAGCTGGGGCTGGGGAGTA 123967 Query 94906 CCACAATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGACATGAGATCATAT 94965 | ||| ||||| ||||| || || ||||| || || | | ||||| | | ||| Sbjct 123966 GCGGCATTGAACAGAGTGGGAGAGGCGTGGGTGAAGTACTTCTGGGACATCAAGTGGTAT 123907 Query 94966 GTTTCAATGACAGATTTGATGTCTGATCCGTGAATGCCGACAGCCACACGCATAATCATG 95025 || |||||| | | ||| || ||||| || |||||||| |||||||| | || | Sbjct 123906 GTCTCAATGGCCCTCTCGATATCCTCGCCGTGGATTCCGACAGCAACACGCATCAGCAAG 123847 Query 95026 TCCTGAGGGCGCTCA 95040 | |||||| |||||| Sbjct 123846 TGCTGAGGACGCTCA 123832 >seq79 Length=198956 Score = 100 bits (110), Expect = 6e-16 Identities = 115/155 (74%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 101918 GTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGG 101977 |||||||| || || || || || |||||||| ||| ||||||| ||||| |||||| Sbjct 141187 GTTGCCTTCGCCGCTGTCGAGGGTATCTTCTTCTCTGGCTCATTCGCCTCCATCTTCTGG 141246 Query 101978 ATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGAC 102037 ||||||| | || | ||||||||||||| | |||||| ||| | || ||| | || Sbjct 141247 CTCAAGAAGCGTGGCCTGATGCCTGGTCTCACTTTCTCCAACGAGCTGATCTCTCGTGAT 141306 Query 102038 GAAGGTCTTCATCGCGACTTTGCATGCATGCTGTT 102072 || ||||| || ||||| || || ||||||| Sbjct 141307 GAGGGTCTCCACACTGACTTCGCTTGTCTGCTGTT 141341 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989571371671180