Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20nordicum_20[genbank_20GCA_5F001278595.1_202015-09-03] 996 sequences; 30,844,022 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq46 127 3e-24 seq79 111 2e-19 >seq46 Length=203589 Score = 127 bits (140), Expect = 3e-24 Identities = 725/1149 (63%), Gaps = 28/1149 (2%) Strand=Plus/Minus Query 62948 AGATGCCAGATTACACACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCA 63007 ||| ||||| || || || || ||||||| || | || | | ||||||||||| Sbjct 124684 AGAAGCCAGGTTGCAGACAGCCACCTCATCAGGGGCACTGTACTCGACAATCTCAGTGCA 124625 Query 63008 AAGATTA---CTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGC 63064 || || |||| ||||| || | || | || |||||||| ||||| || || Sbjct 124624 CAGGTTGGAGCTACGA---ATAGTACCCAGGTTCTTCTGGTTACTCTTCTTGTTGCAAGC 124568 Query 63065 ATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCA 63124 |||||| || || || ||||| ||||||| ||| |||| | || | ||| || | ||| Sbjct 124567 ATCCTTGTAGAGCATAAATGGGTTACCAGTCTCAGTCTGGGCCTCAAGAATGGCGTACCA 124508 Query 63125 GACGACTC-GAGCCTTTATTATAGATTTGTATCT----CCTTTCTCTTTCGTA--TAGAG 63177 || | || ||||||| || | ||| | |||| || | |||| | | | Sbjct 124507 GA-GCTTCTGAGCCTTGATGGTC---TTGCGGCCACGGCCTTCCTGCT-CGTACTTCGCG 124453 Query 63178 TATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCTAGGACATTCATCCGGAC 63237 || | | |||||||| || || | |||| ||| | || || | || | Sbjct 124452 TAGAGAGCA--TCGAACTCATCGCCGTAGACATCAGCCAGACCGGGGGCCTCGTTGGGGC 124395 Query 63238 ACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAA 63297 | | | | ||| || |||| ||| || || ||||| |||||||| || |||| | Sbjct 124394 AGAAGAGGGTCCAGTCACCGTTGGCCTCAACACGCTTCATGAAGAGATCGGGGGTCCACA 124335 Query 63298 GAGCTATAAATAGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGA 63357 ||| || || || | | | | ||||| || || ||||| ||||||| Sbjct 124334 AAGCGTAGAAGAGGTCACGAGCGCGAACCTCCTCTTTACCGTGGTTCTTCCGCAGATCGA 124275 Query 63358 GGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTT 63417 ||||| | | | ||| | |||||||| |||| ||| ||||| | | ||||| || | Sbjct 124274 GGAACTCGAAGACATCGGCGTGCCACGGCTCCAGGTAGATGGCAAATGCACCAGGGCGCT 124215 Query 63418 TGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAA 63477 |||| || ||||| || | || | || ||||| ||| | || | || ||| |||| || Sbjct 124214 TGTTACCACCCTGGTCGACATAGCGTGCAGTGTTGTTAAACACACGCAGCATAGGAACAA 124155 Query 63478 TACCGTTTGATATACCATTGGTACCGGAGATATAGCCTCCACTGGCACGAATA--TTACT 63535 ||||||| || || ||||| || || || || | || |||||| | Sbjct 124154 TACCGTTGGAGGAGCCGTTGGTTCCACCAATGTAAGAACCGGTAGCGCGAATACGGTGGA 124095 Query 63536 AATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTC 63595 ||| ||||| || || || || | || ||||| | || ||| || | || || Sbjct 124094 CATT--CAGACCGATACCACCAGCGGTCTTGGAGATCATGGCACATGTCTTGAGAGTATC 124037 Query 63596 ATAGATGCCTTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTG 63655 ||||| || || ||||| ||| || ||| | | || || || | | ||| | Sbjct 124036 GTAGATACCCTCAATGCTGTCAGCGCTCACATCGACCAGGAAGCAAGATGCAAGCTGGGG 123977 Query 63656 ACGAGTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAG 63715 | | ||| | ||||| || | || ||||| ||||| || || | || | || | Sbjct 123976 CTGGGGAGTAGCGGCATTGAACAGAGTGGGAGAGGCGTGGGTGAAGTACTTCTGGGACAT 123917 Query 63716 TAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACG 63775 | | ||| |||||||| || || |||||| || ||||| || || ||||| Sbjct 123916 CAAGTGGTATGTCTCAATGGCCCTCTCGATATCCTCGCCGTGGATTCCGACAGCAACACG 123857 Query 63776 CATTAACATGTGCTGAGGTCTTTCAACAATTTTGTTGTTTATTTTCAACAAGTAGGATTT 63835 ||| | || ||||||||| | ||| ||| ||| ||| || | | ||| || Sbjct 123856 CATCAGCAAGTGCTGAGGACGCTCAGCAACATTGCCGTTAATGCGAAGAAGGTATGAACG 123797 Query 63836 TTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGA 63895 || | || || || || || ||||||| ||||| || ||||| | ||| |||| Sbjct 123796 CTCGAGGGTCTTGAATCCGAAGAAGTTGTAGTTGAAGTCACGGTCGTACACAATGGCCGA 123737 Query 63896 ATTGAGCTTATCCTTATATTTGTTAACTATATC--CATGGTAATACTTGAAATAATCGGA 63953 ||||||| || | || | || || || ||| | | |||| || || ||| Sbjct 123736 GTTGAGCTCCTCGGCGTGCTTCATTACAATCTCGTAATGTTCCT--TTGAGATCATAGGA 123679 Query 63954 GAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAAT 64013 | | | || || || || || || |||| | | | ||| || || | ||| Sbjct 123678 GCAGGCTTATTGTTCTTGGGGTTCACGTAGTGGTACAGATCGGAGATGACCATAGAGAAT 123619 Query 64014 AGtttttttGTTTCCTTGTGTAGATTTGATATGGCTATTCTGGCGGCTAGAATGGCATAA 64073 | ||||| |||| |||||| || || || | ||| || | || || |||||||| || Sbjct 123618 TGCTTTTTAGTTTGCTTGTGGAGGTTCGAAACGGCGATACGTGCAGCCAGAATGGCGTAG 123559 Query 64074 TCCGGATGT 64082 || || ||| Sbjct 123558 TCGGGGTGT 123550 >seq79 Length=198956 Score = 111 bits (122), Expect = 2e-19 Identities = 117/154 (76%), Gaps = 0/154 (0%) Strand=Plus/Minus Query 33573 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAA 33632 |||| || ||| ||||| || ||| |||||||| || | | || | ||||| || Sbjct 141341 AACAGCAGACAAGCGAAGTCAGTGTGGAGACCCTCATCACGAGAGATCAGCTCGTTGGAG 141282 Query 33633 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCG 33692 || ||||| || ||||| ||||||||||| || ||||| || ||||| |||||||| || Sbjct 141281 AAAGTGAGACCAGGCATCAGGCCACGCTTCTTGAGCCAGAAGATGGAGGCGAATGAGCCA 141222 Query 33693 GAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAA 33726 || |||||||| || || || || || ||||||| Sbjct 141221 GAGAAGAAGATACCCTCGACAGCGGCGAAGGCAA 141188 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629809758770880