Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20nordicum_20[genbank_20GCA_5F001278595.1_202015-09-03]
996 sequences; 30,844,022 total letters
Query= NC_003310.1
Length=196858
Score E
Sequences producing significant alignments: (Bits) Value
seq46 127 3e-24
seq79 111 2e-19
>seq46
Length=203589
Score = 127 bits (140), Expect = 3e-24
Identities = 725/1149 (63%), Gaps = 28/1149 (2%)
Strand=Plus/Minus
Query 62948 AGATGCCAGATTACACACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCA 63007
||| ||||| || || || || ||||||| || | || | | |||||||||||
Sbjct 124684 AGAAGCCAGGTTGCAGACAGCCACCTCATCAGGGGCACTGTACTCGACAATCTCAGTGCA 124625
Query 63008 AAGATTA---CTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGC 63064
|| || |||| ||||| || | || | || |||||||| ||||| || ||
Sbjct 124624 CAGGTTGGAGCTACGA---ATAGTACCCAGGTTCTTCTGGTTACTCTTCTTGTTGCAAGC 124568
Query 63065 ATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCA 63124
|||||| || || || ||||| ||||||| ||| |||| | || | ||| || | |||
Sbjct 124567 ATCCTTGTAGAGCATAAATGGGTTACCAGTCTCAGTCTGGGCCTCAAGAATGGCGTACCA 124508
Query 63125 GACGACTC-GAGCCTTTATTATAGATTTGTATCT----CCTTTCTCTTTCGTA--TAGAG 63177
|| | || ||||||| || | ||| | |||| || | |||| | | |
Sbjct 124507 GA-GCTTCTGAGCCTTGATGGTC---TTGCGGCCACGGCCTTCCTGCT-CGTACTTCGCG 124453
Query 63178 TATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCTAGGACATTCATCCGGAC 63237
|| | | |||||||| || || | |||| ||| | || || | || |
Sbjct 124452 TAGAGAGCA--TCGAACTCATCGCCGTAGACATCAGCCAGACCGGGGGCCTCGTTGGGGC 124395
Query 63238 ACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAA 63297
| | | | ||| || |||| ||| || || ||||| |||||||| || |||| |
Sbjct 124394 AGAAGAGGGTCCAGTCACCGTTGGCCTCAACACGCTTCATGAAGAGATCGGGGGTCCACA 124335
Query 63298 GAGCTATAAATAGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGA 63357
||| || || || | | | | ||||| || || ||||| |||||||
Sbjct 124334 AAGCGTAGAAGAGGTCACGAGCGCGAACCTCCTCTTTACCGTGGTTCTTCCGCAGATCGA 124275
Query 63358 GGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTT 63417
||||| | | | ||| | |||||||| |||| ||| ||||| | | ||||| || |
Sbjct 124274 GGAACTCGAAGACATCGGCGTGCCACGGCTCCAGGTAGATGGCAAATGCACCAGGGCGCT 124215
Query 63418 TGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAA 63477
|||| || ||||| || | || | || ||||| ||| | || | || ||| |||| ||
Sbjct 124214 TGTTACCACCCTGGTCGACATAGCGTGCAGTGTTGTTAAACACACGCAGCATAGGAACAA 124155
Query 63478 TACCGTTTGATATACCATTGGTACCGGAGATATAGCCTCCACTGGCACGAATA--TTACT 63535
||||||| || || ||||| || || || || | || |||||| |
Sbjct 124154 TACCGTTGGAGGAGCCGTTGGTTCCACCAATGTAAGAACCGGTAGCGCGAATACGGTGGA 124095
Query 63536 AATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTC 63595
||| ||||| || || || || | || ||||| | || ||| || | || ||
Sbjct 124094 CATT--CAGACCGATACCACCAGCGGTCTTGGAGATCATGGCACATGTCTTGAGAGTATC 124037
Query 63596 ATAGATGCCTTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTG 63655
||||| || || ||||| ||| || ||| | | || || || | | ||| |
Sbjct 124036 GTAGATACCCTCAATGCTGTCAGCGCTCACATCGACCAGGAAGCAAGATGCAAGCTGGGG 123977
Query 63656 ACGAGTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAG 63715
| | ||| | ||||| || | || ||||| ||||| || || | || | || |
Sbjct 123976 CTGGGGAGTAGCGGCATTGAACAGAGTGGGAGAGGCGTGGGTGAAGTACTTCTGGGACAT 123917
Query 63716 TAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACG 63775
| | ||| |||||||| || || |||||| || ||||| || || |||||
Sbjct 123916 CAAGTGGTATGTCTCAATGGCCCTCTCGATATCCTCGCCGTGGATTCCGACAGCAACACG 123857
Query 63776 CATTAACATGTGCTGAGGTCTTTCAACAATTTTGTTGTTTATTTTCAACAAGTAGGATTT 63835
||| | || ||||||||| | ||| ||| ||| ||| || | | ||| ||
Sbjct 123856 CATCAGCAAGTGCTGAGGACGCTCAGCAACATTGCCGTTAATGCGAAGAAGGTATGAACG 123797
Query 63836 TTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGA 63895
|| | || || || || || ||||||| ||||| || ||||| | ||| ||||
Sbjct 123796 CTCGAGGGTCTTGAATCCGAAGAAGTTGTAGTTGAAGTCACGGTCGTACACAATGGCCGA 123737
Query 63896 ATTGAGCTTATCCTTATATTTGTTAACTATATC--CATGGTAATACTTGAAATAATCGGA 63953
||||||| || | || | || || || ||| | | |||| || || |||
Sbjct 123736 GTTGAGCTCCTCGGCGTGCTTCATTACAATCTCGTAATGTTCCT--TTGAGATCATAGGA 123679
Query 63954 GAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAAT 64013
| | | || || || || || || |||| | | | ||| || || | |||
Sbjct 123678 GCAGGCTTATTGTTCTTGGGGTTCACGTAGTGGTACAGATCGGAGATGACCATAGAGAAT 123619
Query 64014 AGtttttttGTTTCCTTGTGTAGATTTGATATGGCTATTCTGGCGGCTAGAATGGCATAA 64073
| ||||| |||| |||||| || || || | ||| || | || || |||||||| ||
Sbjct 123618 TGCTTTTTAGTTTGCTTGTGGAGGTTCGAAACGGCGATACGTGCAGCCAGAATGGCGTAG 123559
Query 64074 TCCGGATGT 64082
|| || |||
Sbjct 123558 TCGGGGTGT 123550
>seq79
Length=198956
Score = 111 bits (122), Expect = 2e-19
Identities = 117/154 (76%), Gaps = 0/154 (0%)
Strand=Plus/Minus
Query 33573 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAA 33632
|||| || ||| ||||| || ||| |||||||| || | | || | ||||| ||
Sbjct 141341 AACAGCAGACAAGCGAAGTCAGTGTGGAGACCCTCATCACGAGAGATCAGCTCGTTGGAG 141282
Query 33633 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCG 33692
|| ||||| || ||||| ||||||||||| || ||||| || ||||| |||||||| ||
Sbjct 141281 AAAGTGAGACCAGGCATCAGGCCACGCTTCTTGAGCCAGAAGATGGAGGCGAATGAGCCA 141222
Query 33693 GAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAA 33726
|| |||||||| || || || || || |||||||
Sbjct 141221 GAGAAGAAGATACCCTCGACAGCGGCGAAGGCAA 141188
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 629809758770880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |