Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20nordicum_20[genbank_20GCA_5F001278595.1_202015-09-03] 996 sequences; 30,844,022 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq79 98.7 1e-15 seq601 82.4 8e-11 >seq79 Length=198956 Score = 98.7 bits (108), Expect = 1e-15 Identities = 159/226 (70%), Gaps = 2/226 (1%) Strand=Plus/Plus Query 52837 GAGGCCGTCGACATTGAAAAAGAGTTTTTTACGGACGCTTTACCCGTATCAT-TGTTGGG 52895 |||||||||| ||| || | ||||| | || |||||| | ||| | | | || | || Sbjct 141394 GAGGCCGTCGGCATCGAGCAGGAGTTCCTGACTGACGCTCTTCCC-TGTGGTCTGCTTGG 141452 Query 52896 CATGAACGCGACCATGATGTGCGAGTACATCGAGTTTGTTGCGGACAGACTGTTGATGCA 52955 ||||||| | | |||||||||||||||||||||| || || ||| | ||| || || Sbjct 141453 CATGAACTCCAAGCTGATGTGCGAGTACATCGAGTTCGTCGCTGACCGCCTGCTGGTGGC 141512 Query 52956 GCTCGGTCAGCCGAAATACTATAATGCGCGTAACCCCTTTTCGTTTATGAACAACATATC 53015 ||||| | ||| ||||| || || |||||||| || ||| | ||| || Sbjct 141513 CCTCGGCAACAAGAAGTACTACAACGCTACCAACCCCTTCGACTTCATGGAGTCCATCTC 141572 Query 53016 GCTCGAGGGCAAAACAAACTTTTTCGAGAGACGTGTGGGCGAGTAC 53061 || | ||||| || ||||| ||||||| ||||| || || ||| Sbjct 141573 CCTGGCTGGCAAGACCAACTTCTTCGAGAAGCGTGTCGGTGACTAC 141618 >seq601 Length=120753 Score = 82.4 bits (90), Expect = 8e-11 Identities = 157/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || || |||| ||| | || | ||| | || ||||| ||||||||||| || || Sbjct 55819 CCACCACGTAGACGAAGGACGAGGTGGAGGGTGGACTCCTTTTGAATGTTGTAGTCCGAA 55878 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | || | |||||| ||||| || || || |||| ||||| ||||| ||||| || Sbjct 55879 AGAGTACGTCCGTCTTCAAGCTGCTTGCCTGCGAAGATGAGACGCTGCTGGTCGGGGGGA 55938 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716 ||||| || || || ||| | || | || | | || | ||||||| | ||| || Sbjct 55939 ATGCCCTCCTTATC-TTGAATCTTGGACTTCACATTATCGATGGTGTCGGATGACTCGAC 55997 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 |||| || | |||||||| || | ||| || ||||| || |||||| Sbjct 55998 TTCAAGTGTAATAGTCTTGCCAGTGAGCGTCTTCACGAAAATCTGCATA 56046 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496057824003200