Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20nordicum_20[genbank_20GCA_5F001278595.1_202015-09-03]
996 sequences; 30,844,022 total letters
Query= NC_003529.1
Length=155060
Score E
Sequences producing significant alignments: (Bits) Value
seq79 98.7 1e-15
seq601 82.4 8e-11
>seq79
Length=198956
Score = 98.7 bits (108), Expect = 1e-15
Identities = 159/226 (70%), Gaps = 2/226 (1%)
Strand=Plus/Plus
Query 52837 GAGGCCGTCGACATTGAAAAAGAGTTTTTTACGGACGCTTTACCCGTATCAT-TGTTGGG 52895
|||||||||| ||| || | ||||| | || |||||| | ||| | | | || | ||
Sbjct 141394 GAGGCCGTCGGCATCGAGCAGGAGTTCCTGACTGACGCTCTTCCC-TGTGGTCTGCTTGG 141452
Query 52896 CATGAACGCGACCATGATGTGCGAGTACATCGAGTTTGTTGCGGACAGACTGTTGATGCA 52955
||||||| | | |||||||||||||||||||||| || || ||| | ||| || ||
Sbjct 141453 CATGAACTCCAAGCTGATGTGCGAGTACATCGAGTTCGTCGCTGACCGCCTGCTGGTGGC 141512
Query 52956 GCTCGGTCAGCCGAAATACTATAATGCGCGTAACCCCTTTTCGTTTATGAACAACATATC 53015
||||| | ||| ||||| || || |||||||| || ||| | ||| ||
Sbjct 141513 CCTCGGCAACAAGAAGTACTACAACGCTACCAACCCCTTCGACTTCATGGAGTCCATCTC 141572
Query 53016 GCTCGAGGGCAAAACAAACTTTTTCGAGAGACGTGTGGGCGAGTAC 53061
|| | ||||| || ||||| ||||||| ||||| || || |||
Sbjct 141573 CCTGGCTGGCAAGACCAACTTCTTCGAGAAGCGTGTCGGTGACTAC 141618
>seq601
Length=120753
Score = 82.4 bits (90), Expect = 8e-11
Identities = 157/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597
|| || |||| ||| | || | ||| | || ||||| ||||||||||| || ||
Sbjct 55819 CCACCACGTAGACGAAGGACGAGGTGGAGGGTGGACTCCTTTTGAATGTTGTAGTCCGAA 55878
Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657
| || | |||||| ||||| || || || |||| ||||| ||||| ||||| ||
Sbjct 55879 AGAGTACGTCCGTCTTCAAGCTGCTTGCCTGCGAAGATGAGACGCTGCTGGTCGGGGGGA 55938
Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716
||||| || || || ||| | || | || | | || | ||||||| | ||| ||
Sbjct 55939 ATGCCCTCCTTATC-TTGAATCTTGGACTTCACATTATCGATGGTGTCGGATGACTCGAC 55997
Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765
|||| || | |||||||| || | ||| || ||||| || ||||||
Sbjct 55998 TTCAAGTGTAATAGTCTTGCCAGTGAGCGTCTTCACGAAAATCTGCATA 56046
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496057824003200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |