Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20nordicum_20[genbank_20GCA_5F001278595.1_202015-09-03] 996 sequences; 30,844,022 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq46 132 7e-26 seq79 131 2e-25 >seq46 Length=203589 Score = 132 bits (146), Expect = 7e-26 Identities = 729/1153 (63%), Gaps = 26/1153 (2%) Strand=Plus/Minus Query 79615 GCGACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATTTCA 79674 |||| ||| ||||| || || || || ||||||| || | || | | || ||| Sbjct 124689 GCGAGAGAAGCCAGGTTGCAGACAGCCACCTCATCAGGGGCACTGTACTCGACAATCTCA 124630 Query 79675 GTGCAGAGGTTA---CTACACTTAATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTA 79731 ||||| ||||| |||| ||| || || | || | || |||||||| ||||| Sbjct 124629 GTGCACAGGTTGGAGCTACG---AATAGTACCCAGGTTCTTCTGGTTACTCTTCTTGTTG 124573 Query 79732 CACGCATCCTTATAAAGAATGAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCT 79791 || |||||||| || || || || || ||||||| ||| |||| | || | ||| || Sbjct 124572 CAAGCATCCTTGTAGAGCATAAATGGGTTACCAGTCTCAGTCTGGGCCTCAAGAATGGCG 124513 Query 79792 TTCCAGACGACTC-GAGCCTTTATTATAGACTTGTATCT----CTTTTCTCTTTCGTATT 79846 | ||||| | || ||||||| || | |||| | | || || | |||| | Sbjct 124512 TACCAGA-GCTTCTGAGCCTTGATGGT---CTTGCGGCCACGGCCTTCCTGCT-CGTACT 124458 Query 79847 GTGTATATAATCGTTCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAG 79906 | || | |||||||| || || | ||||| | | || || |||| | Sbjct 124457 TCGCGTAGAGAGCATCGAACTCATCGCCGTAGACATCAGCCAGACCGGGGGCCTCGTTGG 124398 Query 79907 GACACATCAACGACCACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCC 79966 | || | | | ||| || || | ||| || || ||||| |||||||| || ||| Sbjct 124397 GGCAGAAGAGGGTCCAGTCACCGTTGGCCTCAACACGCTTCATGAAGAGATCGGGGGTCC 124338 Query 79967 AAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGAT 80026 | | ||| || || || | | | | |||||| || || ||||| |||| Sbjct 124337 ACAAAGCGTAGAAGAGGTCACGAGCGCGAACCTCCTCTTTACCGTGGTTCTTCCGCAGAT 124278 Query 80027 CGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTC 80086 |||||||| | | | ||| | |||||||| |||| ||| ||||| | | || || | Sbjct 124277 CGAGGAACTCGAAGACATCGGCGTGCCACGGCTCCAGGTAGATGGCAAATGCACCAGGGC 124218 Query 80087 GTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAA 80146 | ||||| || ||||| || | || | || ||||| ||| | || | || ||| |||| Sbjct 124217 GCTTGTTACCACCCTGGTCGACATAGCGTGCAGTGTTGTTAAACACACGCAGCATAGGAA 124158 Query 80147 TAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATA--TT 80204 |||||| ||||| | || ||||| || || || || | || |||||| | Sbjct 124157 CAATACCGTTGGAGGAGCCGTTGGTTCCACCAATGTAAGAACCGGTAGCGCGAATACGGT 124098 Query 80205 ACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGT 80264 ||| ||||| || || || || | || ||||| | || ||| || | || Sbjct 124097 GGACATT--CAGACCGATACCACCAGCGGTCTTGGAGATCATGGCACATGTCTTGAGAGT 124040 Query 80265 ATCATAGATGCCCTCTATGCTATCATCAATCATGTTAAGTAGAAAACAGCTAGACATTTG 80324 ||| ||||| ||||| ||||| ||| | ||| | | || || || | | || Sbjct 124039 ATCGTAGATACCCTCAATGCTGTCAGCGCTCACATCGACCAGGAAGCAAGATGCAAGCTG 123980 Query 80325 GTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGA 80384 | | | ||| | ||||| || | || ||||| ||||| || || | || | || Sbjct 123979 GGGCTGGGGAGTAGCGGCATTGAACAGAGTGGGAGAGGCGTGGGTGAAGTACTTCTGGGA 123920 Query 80385 CAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATTGATGAATTCCTACCGCGAC 80444 || | | ||| |||||||| || || |||||| || ||||| || || || Sbjct 123919 CATCAAGTGGTATGTCTCAATGGCCCTCTCGATATCCTCGCCGTGGATTCCGACAGCAAC 123860 Query 80445 ACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAAGA 80504 |||||| | || ||||||||| | ||| | | ||| || || | | ||| || Sbjct 123859 ACGCATCAGCAAGTGCTGAGGACGCTCAGCAACATTGCCGTTAATGCGAAGAAGGTATGA 123800 Query 80505 TTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAAC 80564 || | || || || || || ||||||| ||||| || ||||| | ||| | Sbjct 123799 ACGCTCGAGGGTCTTGAATCCGAAGAAGTTGTAGTTGAAGTCACGGTCGTACACAATGGC 123740 Query 80565 CGAGTTGAGTTTATCCTTATATTTGTTAACTAC-ATC-CATGGTGATAC-TTGAAATAAT 80621 ||||||||| |||| | || | ||| ||| | | || | | |||| || || Sbjct 123739 CGAGTTGAG---CTCCTCGGCGTGCTTCATTACAATCTCGTAATGTTCCTTTGAGATCAT 123683 Query 80622 CGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACT 80681 |||| | | || || || || || || |||| | | | ||| || || | Sbjct 123682 AGGAGCAGGCTTATTGTTCTTGGGGTTCACGTAGTGGTACAGATCGGAGATGACCATAGA 123623 Query 80682 AAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAAAATGGC 80741 ||| | ||||| |||| |||||| || || || ||||| || | || || | |||||| Sbjct 123622 GAATTGCTTTTTAGTTTGCTTGTGGAGGTTCGAAACGGCGATACGTGCAGCCAGAATGGC 123563 Query 80742 ATAATCTGGATGT 80754 || || || ||| Sbjct 123562 GTAGTCGGGGTGT 123550 >seq79 Length=198956 Score = 131 bits (144), Expect = 2e-25 Identities = 160/218 (73%), Gaps = 3/218 (1%) Strand=Plus/Minus Query 49951 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAA 50010 |||| || ||| ||||| || ||| |||||||| || | | || || |||||||| Sbjct 141341 AACAGCAGACAAGCGAAGTCAGTGTGGAGACCCTCATCACGAGAGATCAGCTCGTTGGAG 141282 Query 50011 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCA 50070 || ||||| || ||||| ||||||||||| || ||||| || ||||| || ||||| ||| Sbjct 141281 AAAGTGAGACCAGGCATCAGGCCACGCTTCTTGAGCCAGAAGATGGAGGCGAATGAGCCA 141222 Query 50071 GAAAAGAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGG---CG 50127 || |||||||| || || || ||||| |||||||| || | | | | | | || Sbjct 141221 GAGAAGAAGATACCCTCGACAGCGGCGAAGGCAACCAGACGCGAAGCGAAGGTTGACTCG 141162 Query 50128 CTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTT 50165 | ||| | |||||||| | ||||| | ||||||||| Sbjct 141161 CGGTCGTTGATCCACTTGAGGGCCCAGTTGGCCTTCTT 141124 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718259857553440