Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20nordicum_20[genbank_20GCA_5F001278595.1_202015-09-03]
996 sequences; 30,844,022 total letters
Query= NC_004105.1
Length=209771
Score E
Sequences producing significant alignments: (Bits) Value
seq46 120 4e-22
seq79 116 5e-21
>seq46
Length=203589
Score = 120 bits (132), Expect = 4e-22
Identities = 723/1151 (63%), Gaps = 20/1151 (2%)
Strand=Plus/Minus
Query 71697 GGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCGGCA---TATTGTATAAT 71753
||| | ||| ||||| || || || || ||||||| || |||| || | | |||
Sbjct 124690 GGCGAGAGAAGCCAGGTTGCAGACAGCCACCTCATCAGG---GGCACTGTACTCGACAAT 124634
Query 71754 TTCAGTGCAAAGATTA---CTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTT 71810
|||||||| || || |||| || || || | || | || |||||||| ||
Sbjct 124633 CTCAGTGCACAGGTTGGAGCTACGA---ATAGTACCCAGGTTCTTCTGGTTACTCTTCTT 124577
Query 71811 GTTACACGCATCCTTATAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCTATAAT 71870
||| || |||||||| || || ||||| || ||||||| ||| |||| | || | |||
Sbjct 124576 GTTGCAAGCATCCTTGTAGAGCATAAATGGGTTACCAGTCTCAGTCTGGGCCTCAAGAAT 124517
Query 71871 CGCTTTCCAGACGACTC-GAGCCTTTATTATATTCTTGTATCTCTTTTCTCTTTCGTATT 71929
|| | ||||| | || ||||||| || | || | | ||| ||||| |
Sbjct 124516 GGCGTACCAGA-GCTTCTGAGCCTTGATGGTCTTGCGGCCACGGCCTTCCTGCTCGTACT 124458
Query 71930 GTGTATATAATCGTTCGAACTCGTCTCCCCAAGCATTGTCTAATCCAGGACATTCATTCG 71989
| || | |||||||| || || | ||| | | || || || || |
Sbjct 124457 TCGCGTAGAGAGCATCGAACTCATCGCCGTAGACATCAGCCAGACCGGGGGCCTCGTTGG 124398
Query 71990 GACACATCAATGACCACTCTCCATCATCATTTACTCGTTTCATAAAGAGATCAGGAATCC 72049
| || | | | ||| || || | | | || || ||||| |||||||| || |||
Sbjct 124397 GGCAGAAGAGGGTCCAGTCACCGTTGGCCTCAACACGCTTCATGAAGAGATCGGGGGTCC 124338
Query 72050 AAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGAT 72109
| | ||| || || || | | | | |||||| || || ||||| ||||
Sbjct 124337 ACAAAGCGTAGAAGAGGTCACGAGCGCGAACCTCCTCTTTACCGTGGTTCTTCCGCAGAT 124278
Query 72110 CGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGCC 72169
|||||||| | | | ||| | |||||||| |||| ||| ||||| | | || || |
Sbjct 124277 CGAGGAACTCGAAGACATCGGCGTGCCACGGCTCCAGGTAGATGGCAAATGCACCAGGGC 124218
Query 72170 GTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAA 72229
| ||||| || ||||| || | || | || ||||| ||| | || | || ||| ||||
Sbjct 124217 GCTTGTTACCACCCTGGTCGACATAGCGTGCAGTGTTGTTAAACACACGCAGCATAGGAA 124158
Query 72230 TAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATA--TT 72287
|||||| ||||| | || ||||| || || || || | || |||||| |
Sbjct 124157 CAATACCGTTGGAGGAGCCGTTGGTTCCACCAATGTAAGAACCGGTAGCGCGAATACGGT 124098
Query 72288 GCTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGT 72347
| ||| ||||| || || || || | || ||||| | || ||| || | ||
Sbjct 124097 GGACATT--CAGACCGATACCACCAGCGGTCTTGGAGATCATGGCACATGTCTTGAGAGT 124040
Query 72348 ATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTG 72407
||| ||||| ||||| || || ||| | ||| | | || || || | | ||
Sbjct 124039 ATCGTAGATACCCTCAATGCTGTCAGCGCTCACATCGACCAGGAAGCAAGATGCAAGCTG 123980
Query 72408 GTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGA 72467
| | | ||| | ||||| || | || ||||| ||||| || || | || | ||
Sbjct 123979 GGGCTGGGGAGTAGCGGCATTGAACAGAGTGGGAGAGGCGTGGGTGAAGTACTTCTGGGA 123920
Query 72468 CAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATTGATGTATTCCTACCGCGAC 72527
|| | | ||| |||||||| || || |||||| || ||||| || || ||
Sbjct 123919 CATCAAGTGGTATGTCTCAATGGCCCTCTCGATATCCTCGCCGTGGATTCCGACAGCAAC 123860
Query 72528 ACGCATTAACATATGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAGGA 72587
|||||| | || |||||||| | ||| | | ||| || || | | ||| ||
Sbjct 123859 ACGCATCAGCAAGTGCTGAGGACGCTCAGCAACATTGCCGTTAATGCGAAGAAGGTATGA 123800
Query 72588 TTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAAC 72647
|| | || || || || || ||||||| ||||| || ||||| | ||| |
Sbjct 123799 ACGCTCGAGGGTCTTGAATCCGAAGAAGTTGTAGTTGAAGTCACGGTCGTACACAATGGC 123740
Query 72648 CGAATTGAGTTTATCCTTATATTTGTTAACTATATCCATGGTGATAC-TTGAAATAATCG 72706
||| ||||| | || | || | || || | | | || | | |||| || || |
Sbjct 123739 CGAGTTGAGCTCCTCGGCGTGCTTCATTACAATCT-CGTAATGTTCCTTTGAGATCATAG 123681
Query 72707 GAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAA 72766
||| | | || || || || || || |||| | | | ||| || || | |
Sbjct 123680 GAGCAGGCTTATTGTTCTTGGGGTTCACGTAGTGGTACAGATCGGAGATGACCATAGAGA 123621
Query 72767 ATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATGGCAT 72826
|| | ||||| |||| |||||| || || || ||||| || | || || |||||||| |
Sbjct 123620 ATTGCTTTTTAGTTTGCTTGTGGAGGTTCGAAACGGCGATACGTGCAGCCAGAATGGCGT 123561
Query 72827 AATCTGGATGT 72837
| || || |||
Sbjct 123560 AGTCGGGGTGT 123550
>seq79
Length=198956
Score = 116 bits (128), Expect = 5e-21
Identities = 118/154 (77%), Gaps = 0/154 (0%)
Strand=Plus/Minus
Query 42056 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAA 42115
|||| || ||| ||||| || ||| ||||||||||| | | || | ||||||||
Sbjct 141341 AACAGCAGACAAGCGAAGTCAGTGTGGAGACCCTCATCACGAGAGATCAGCTCGTTGGAG 141282
Query 42116 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCA 42175
|| ||||| || ||||| ||||||||||| || ||||| || || || || ||||| |||
Sbjct 141281 AAAGTGAGACCAGGCATCAGGCCACGCTTCTTGAGCCAGAAGATGGAGGCGAATGAGCCA 141222
Query 42176 GAAAAGAAGATTCCTTCTACTGCCGCAAAGGCAA 42209
|| |||||||| || || || || || |||||||
Sbjct 141221 GAGAAGAAGATACCCTCGACAGCGGCGAAGGCAA 141188
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 671130844316960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |