Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20nordicum_20[genbank_20GCA_5F001278595.1_202015-09-03] 996 sequences; 30,844,022 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq46 120 4e-22 seq79 116 5e-21 >seq46 Length=203589 Score = 120 bits (132), Expect = 4e-22 Identities = 723/1151 (63%), Gaps = 20/1151 (2%) Strand=Plus/Minus Query 71697 GGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCGGCA---TATTGTATAAT 71753 ||| | ||| ||||| || || || || ||||||| || |||| || | | ||| Sbjct 124690 GGCGAGAGAAGCCAGGTTGCAGACAGCCACCTCATCAGG---GGCACTGTACTCGACAAT 124634 Query 71754 TTCAGTGCAAAGATTA---CTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTT 71810 |||||||| || || |||| || || || | || | || |||||||| || Sbjct 124633 CTCAGTGCACAGGTTGGAGCTACGA---ATAGTACCCAGGTTCTTCTGGTTACTCTTCTT 124577 Query 71811 GTTACACGCATCCTTATAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCTATAAT 71870 ||| || |||||||| || || ||||| || ||||||| ||| |||| | || | ||| Sbjct 124576 GTTGCAAGCATCCTTGTAGAGCATAAATGGGTTACCAGTCTCAGTCTGGGCCTCAAGAAT 124517 Query 71871 CGCTTTCCAGACGACTC-GAGCCTTTATTATATTCTTGTATCTCTTTTCTCTTTCGTATT 71929 || | ||||| | || ||||||| || | || | | ||| ||||| | Sbjct 124516 GGCGTACCAGA-GCTTCTGAGCCTTGATGGTCTTGCGGCCACGGCCTTCCTGCTCGTACT 124458 Query 71930 GTGTATATAATCGTTCGAACTCGTCTCCCCAAGCATTGTCTAATCCAGGACATTCATTCG 71989 | || | |||||||| || || | ||| | | || || || || | Sbjct 124457 TCGCGTAGAGAGCATCGAACTCATCGCCGTAGACATCAGCCAGACCGGGGGCCTCGTTGG 124398 Query 71990 GACACATCAATGACCACTCTCCATCATCATTTACTCGTTTCATAAAGAGATCAGGAATCC 72049 | || | | | ||| || || | | | || || ||||| |||||||| || ||| Sbjct 124397 GGCAGAAGAGGGTCCAGTCACCGTTGGCCTCAACACGCTTCATGAAGAGATCGGGGGTCC 124338 Query 72050 AAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGAT 72109 | | ||| || || || | | | | |||||| || || ||||| |||| Sbjct 124337 ACAAAGCGTAGAAGAGGTCACGAGCGCGAACCTCCTCTTTACCGTGGTTCTTCCGCAGAT 124278 Query 72110 CGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGCC 72169 |||||||| | | | ||| | |||||||| |||| ||| ||||| | | || || | Sbjct 124277 CGAGGAACTCGAAGACATCGGCGTGCCACGGCTCCAGGTAGATGGCAAATGCACCAGGGC 124218 Query 72170 GTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAA 72229 | ||||| || ||||| || | || | || ||||| ||| | || | || ||| |||| Sbjct 124217 GCTTGTTACCACCCTGGTCGACATAGCGTGCAGTGTTGTTAAACACACGCAGCATAGGAA 124158 Query 72230 TAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATA--TT 72287 |||||| ||||| | || ||||| || || || || | || |||||| | Sbjct 124157 CAATACCGTTGGAGGAGCCGTTGGTTCCACCAATGTAAGAACCGGTAGCGCGAATACGGT 124098 Query 72288 GCTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGT 72347 | ||| ||||| || || || || | || ||||| | || ||| || | || Sbjct 124097 GGACATT--CAGACCGATACCACCAGCGGTCTTGGAGATCATGGCACATGTCTTGAGAGT 124040 Query 72348 ATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTG 72407 ||| ||||| ||||| || || ||| | ||| | | || || || | | || Sbjct 124039 ATCGTAGATACCCTCAATGCTGTCAGCGCTCACATCGACCAGGAAGCAAGATGCAAGCTG 123980 Query 72408 GTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGA 72467 | | | ||| | ||||| || | || ||||| ||||| || || | || | || Sbjct 123979 GGGCTGGGGAGTAGCGGCATTGAACAGAGTGGGAGAGGCGTGGGTGAAGTACTTCTGGGA 123920 Query 72468 CAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATTGATGTATTCCTACCGCGAC 72527 || | | ||| |||||||| || || |||||| || ||||| || || || Sbjct 123919 CATCAAGTGGTATGTCTCAATGGCCCTCTCGATATCCTCGCCGTGGATTCCGACAGCAAC 123860 Query 72528 ACGCATTAACATATGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAGGA 72587 |||||| | || |||||||| | ||| | | ||| || || | | ||| || Sbjct 123859 ACGCATCAGCAAGTGCTGAGGACGCTCAGCAACATTGCCGTTAATGCGAAGAAGGTATGA 123800 Query 72588 TTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAAC 72647 || | || || || || || ||||||| ||||| || ||||| | ||| | Sbjct 123799 ACGCTCGAGGGTCTTGAATCCGAAGAAGTTGTAGTTGAAGTCACGGTCGTACACAATGGC 123740 Query 72648 CGAATTGAGTTTATCCTTATATTTGTTAACTATATCCATGGTGATAC-TTGAAATAATCG 72706 ||| ||||| | || | || | || || | | | || | | |||| || || | Sbjct 123739 CGAGTTGAGCTCCTCGGCGTGCTTCATTACAATCT-CGTAATGTTCCTTTGAGATCATAG 123681 Query 72707 GAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAA 72766 ||| | | || || || || || || |||| | | | ||| || || | | Sbjct 123680 GAGCAGGCTTATTGTTCTTGGGGTTCACGTAGTGGTACAGATCGGAGATGACCATAGAGA 123621 Query 72767 ATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATGGCAT 72826 || | ||||| |||| |||||| || || || ||||| || | || || |||||||| | Sbjct 123620 ATTGCTTTTTAGTTTGCTTGTGGAGGTTCGAAACGGCGATACGTGCAGCCAGAATGGCGT 123561 Query 72827 AATCTGGATGT 72837 | || || ||| Sbjct 123560 AGTCGGGGTGT 123550 >seq79 Length=198956 Score = 116 bits (128), Expect = 5e-21 Identities = 118/154 (77%), Gaps = 0/154 (0%) Strand=Plus/Minus Query 42056 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAA 42115 |||| || ||| ||||| || ||| ||||||||||| | | || | |||||||| Sbjct 141341 AACAGCAGACAAGCGAAGTCAGTGTGGAGACCCTCATCACGAGAGATCAGCTCGTTGGAG 141282 Query 42116 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCA 42175 || ||||| || ||||| ||||||||||| || ||||| || || || || ||||| ||| Sbjct 141281 AAAGTGAGACCAGGCATCAGGCCACGCTTCTTGAGCCAGAAGATGGAGGCGAATGAGCCA 141222 Query 42176 GAAAAGAAGATTCCTTCTACTGCCGCAAAGGCAA 42209 || |||||||| || || || || || ||||||| Sbjct 141221 GAGAAGAAGATACCCTCGACAGCGGCGAAGGCAA 141188 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671130844316960