Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20nordicum_20[genbank_20GCA_5F001278595.1_202015-09-03]
996 sequences; 30,844,022 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq79 150 3e-31
seq46 120 5e-22
>seq79
Length=198956
Score = 150 bits (166), Expect = 3e-31
Identities = 302/440 (69%), Gaps = 31/440 (7%)
Strand=Plus/Plus
Query 125427 CTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTT 125486
||||| || |||||||| || ||||| |||||||| || || || || |||||||
Sbjct 141184 CTGGTTGCCTTCGCCGCTGTCGAGGGTATCTTCTTCTCTGGCTCATTCGCCTCCATCTTC 141243
Query 125487 TGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGA 125546
|||||||||||||| || || ||||| || || || | |||||| | || |||||
Sbjct 141244 TGGCTCAAGAAGCGTGGCCTGATGCCTGGTCTCACTTTCTCCAACGAGCTGATCTCTCGT 141303
Query 125547 GACGAGGGCCTACACTGTGACTTTGCCATTCTACTGTT-TCGCAACT--ATCTGCGTCCC 125603
|| ||||| || ||| |||||| || ||| ||||| || || | | | || |||
Sbjct 141304 GATGAGGGTCTCCACACTGACTTCGCTTGTCTGCTGTTCTCCCACATGAACCACCGCCCC 141363
Query 125604 GAGTGC-AGATCCAGCGATGAAAAGGTCATCAACATTGTAACCGATGCCGTGAGGATAGA 125662
|| | |||| | || ||| || |||||| ||| ||||| | || ||
Sbjct 141364 GACCCCAAGAT----GGTTG---AGGCTAT---CATTGT---CGAGGCCGTCGGCATCGA 141410
Query 125663 ACAAGAGTTTCTAACCGAATCCCTACC----GGTCAGCATGATTGGCATGAACTGCAAGC 125718
|| ||||| || || || | || || |||| || |||||||||||| |||||
Sbjct 141411 GCAGGAGTTCCTGACTGACGCTCTTCCCTGTGGTC----TGCTTGGCATGAACTCCAAGC 141466
Query 125719 TAATGTGCGAGTACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTGATTGGCCGCA 125778
| |||||||||||||| ||||| || || || || || ||| | | | ||| ||
Sbjct 141467 TGATGTGCGAGTACATCGAGTTCGTCGCTGACCGCCTGCTG---GTGGCCCTCGGCAACA 141523
Query 125779 AGA---TTTACAACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGGTA 125835
||| |||||||| | || ||||| || |||||| ||| || || | || |
Sbjct 141524 AGAAGTACTACAACGCTACCAACCCCTTCGACTTCATGGAGTCCATCTCCCTGGCTGGCA 141583
Query 125836 AGACCAACTTTTTCGAGAAG 125855
|||||||||| |||||||||
Sbjct 141584 AGACCAACTTCTTCGAGAAG 141603
>seq46
Length=203589
Score = 120 bits (132), Expect = 5e-22
Identities = 325/488 (67%), Gaps = 12/488 (2%)
Strand=Plus/Plus
Query 96876 CAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGAC 96935
||||| || || || || || || || | ||| ||||| |||| || |||||||| ||
Sbjct 124202 CAGGGTGGTAACAAGCGCCCTGGTGCATTTGCCATCTACCTGGAGCCGTGGCACGCCGAT 124261
Query 96936 GTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGGGAC 96995
|| || || || |||| |||| || ||| || || |||| || || | |||
Sbjct 124262 GTCTTCGAGTTCCTCGATCTGCGGAAGAACCACGGTAAAGAGGAGGTTCGCGCTCGTGAC 124321
Query 96996 TTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAA---CGACGGTGGC 97052
| || || || | ||| || ||| | ||||||||||| || | | ||||||
Sbjct 124322 CTCTTCTACGCTTTGTGGACCCCCGATCTCTTCATGAAGCGTGTTGAGGCCAACGGTG-- 124379
Query 97053 TACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGGCGAAGAG 97112
|||||| ||| | |||||| || | | ||||||||| | ||| || ||||| |||
Sbjct 124380 -ACTGGACCCTCTTCTGCCCCAACGAGGCCCCCGGTCTGGCTGATGTCTACGGCGATGAG 124438
Query 97113 TTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCG-ATACGTGAGACGAGTCGATGC 97171
|| || || ||| || |||||||| || ||||| || |||| | || | ||
Sbjct 124439 TTCGATGCTCTCTACGCGAAGTACGAGCAGGAAGGCCGTGGCCGCAAGACCA-TCAAGGC 124497
Query 97172 ACGAGAA-CTGTGGAAGGCCA-TCGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATT 97229
| |||| || ||| | |||| || ||| ||| ||| |||||||| | || | ||
Sbjct 124498 TC-AGAAGCTCTGGTACGCCATTCTTGA-GGCCCAGACTGAGACTGGTAACCCATTTATG 124555
Query 97230 CTCTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCATCAAGGGC 97289
|||||||||||| | || || || ||||| || |||| || || ||
Sbjct 124556 CTCTACAAGGATGCTTGCAACAAGAAGAGTAACCAGAAGAACCTGGGTACTATTCGTAGC 124615
Query 97290 TCCAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGACGGCAGTTTGCGTT 97349
||||| |||||||| || ||||| |||||| | || || ||| ||| || |||
Sbjct 124616 TCCAACCTGTGCACTGAGATTGTCGAGTACAGTGCCCCTGATGAGGTGGCTGTCTGCAAC 124675
Query 97350 CTGGCATC 97357
||||| ||
Sbjct 124676 CTGGCTTC 124683
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 741049973812960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |