Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20nordicum_20[genbank_20GCA_5F001278595.1_202015-09-03] 996 sequences; 30,844,022 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq601 122 2e-22 seq79 89.7 1e-12 >seq601 Length=120753 Score = 122 bits (134), Expect = 2e-22 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || || | ||| | ||| || || || | || || || || ||||| || ||||| Sbjct 55816 ATACCACCACGTAGACGAAGGACGAGGTGGAGGGTGGACTCCTTTTGAATGTTGTAGTCC 55875 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 || ||||| | |||||||| || || || || || || || || | ||| || || || Sbjct 55876 GAAAGAGTACGTCCGTCTTCAAGCTGCTTGCCTGCGAAGATGAGACGCTGCTGGTCGGGG 55935 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || || || || ||||| |||||||| | || ||||| || | ||| ||| | || Sbjct 55936 GGAATGCCCTCCTTATCTTGAATCTTGGACTTCACATTATCGATGGTGTCGGATGACTCG 55995 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || || |||||||||||||| ||||| || || || || || |||||||| Sbjct 55996 ACTTCAAGTGTAATAGTCTTGCCAGTGAGCGTCTTCACGAAAATCTGCAT 56045 Score = 116 bits (128), Expect = 9e-21 Identities = 146/198 (74%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || ||||| || || ||||| || ||||| | ||||| || || || || ||| Sbjct 55621 GTGGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTACGTCCGTCCTCCAGCTGCTTACCA 55680 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 || || || || | ||| || |||||||| || || || || ||||| ||||| ||| || Sbjct 55681 GCGAAGATAAGGCGCTGCTGGTCAGGAGGAATACCCTCCTTGTCCTGGATCTT-GCTCTT 55739 Query 104483 -ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541 ||||| || | || ||| | || || || |||||||||||||| ||||| || || Sbjct 55740 GACATTATCGATAGTGTCGGATGACTCGACTTCAAGTGTAATAGTCTTGCCAGTGAGCGT 55799 Query 104542 TTTTACAAATATCTGCAT 104559 || || || |||||||| Sbjct 55800 CTTCACGAAAATCTGCAT 55817 >seq79 Length=198956 Score = 89.7 bits (98), Expect = 1e-12 Identities = 108/147 (73%), Gaps = 0/147 (0%) Strand=Plus/Plus Query 269138 GTTGCTTTTGCCGCTGTAGAAGGTATATTCTTTTCGGGGTCTTTTGCCGCTATCTTTTGG 269197 ||||| || |||||||| || ||||| ||||| || || || || ||| | ||||| ||| Sbjct 141187 GTTGCCTTCGCCGCTGTCGAGGGTATCTTCTTCTCTGGCTCATTCGCCTCCATCTTCTGG 141246 Query 269198 TTGAAGAAAAGAGGCCTTATGCCAGGATTAACTTTCTCTAACGAATTGATAAGCAGGGAC 269257 | ||||| | ||||| ||||| || | |||||||| ||||| |||| | || Sbjct 141247 CTCAAGAAGCGTGGCCTGATGCCTGGTCTCACTTTCTCCAACGAGCTGATCTCTCGTGAT 141306 Query 269258 GAAGGTTTACACTGCGACTTCGCTTGT 269284 || ||| | ||| |||||||||||| Sbjct 141307 GAGGGTCTCCACACTGACTTCGCTTGT 141333 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151383706717168