Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20nordicum_20[genbank_20GCA_5F001278595.1_202015-09-03] 996 sequences; 30,844,022 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq46 140 4e-28 seq79 125 9e-24 >seq46 Length=203589 Score = 140 bits (154), Expect = 4e-28 Identities = 731/1154 (63%), Gaps = 26/1154 (2%) Strand=Plus/Minus Query 62891 GGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTC 62950 ||| | ||| ||||| || || || || ||||||| || | || | | ||||| Sbjct 124690 GGCGAGAGAAGCCAGGTTGCAGACAGCCACCTCATCAGGGGCACTGTACTCGACAATCTC 124631 Query 62951 AGTGCAAAGATTA---CTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTT 63007 |||||| || || |||| ||||| || | || | || |||||||| ||||| Sbjct 124630 AGTGCACAGGTTGGAGCTACGA---ATAGTACCCAGGTTCTTCTGGTTACTCTTCTTGTT 124574 Query 63008 ACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGC 63067 || |||||||| || || || ||||| ||||||| ||| |||| | || | ||| || Sbjct 124573 GCAAGCATCCTTGTAGAGCATAAATGGGTTACCAGTCTCAGTCTGGGCCTCAAGAATGGC 124514 Query 63068 TTTCCAGACGACTC-GAGCCTTTATTATAGATTTGTATCT----CCTTTCTCTTTCGTA- 63121 | ||||| | || ||||||| || | ||| | |||| || | |||| Sbjct 124513 GTACCAGA-GCTTCTGAGCCTTGATGGTC---TTGCGGCCACGGCCTTCCTGCT-CGTAC 124459 Query 63122 -TAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCAT 63180 | | ||| | | |||||||| || || | |||| ||| || || || | Sbjct 124458 TTCGCGTAGAGAGCA--TCGAACTCATCGCCGTAGACATCAGCCAGACCGGGGGCCTCGT 124401 Query 63181 CCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAA 63240 || || | | | ||| || |||| ||| || || ||||| |||||||| || Sbjct 124400 TGGGGCAGAAGAGGGTCCAGTCACCGTTGGCCTCAACACGCTTCATGAAGAGATCGGGGG 124341 Query 63241 TCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAA 63300 |||| | ||| || || || | | | | ||||| || || ||||| | Sbjct 124340 TCCACAAAGCGTAGAAGAGGTCACGAGCGCGAACCTCCTCTTTACCGTGGTTCTTCCGCA 124281 Query 63301 GATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAG 63360 ||||||||||| | | | ||| | |||||||| |||| ||| ||||| | | |||| Sbjct 124280 GATCGAGGAACTCGAAGACATCGGCGTGCCACGGCTCCAGGTAGATGGCAAATGCACCAG 124221 Query 63361 GCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTG 63420 | || ||||| || ||||| || | || | || ||||| ||| | || | || ||| | Sbjct 124220 GGCGCTTGTTACCACCCTGGTCGACATAGCGTGCAGTGTTGTTAAACACACGCAGCATAG 124161 Query 63421 GAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAATA- 63479 ||| ||||||||| || || ||||| || || || || | || |||||| Sbjct 124160 GAACAATACCGTTGGAGGAGCCGTTGGTTCCACCAATGTAAGAACCGGTAGCGCGAATAC 124101 Query 63480 -TTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAA 63538 | ||| ||||| || || || || | || ||||| | || ||| || | Sbjct 124100 GGTGGACATT--CAGACCGATACCACCAGCGGTCTTGGAGATCATGGCACATGTCTTGAG 124043 Query 63539 CGTGTCATAGATACCCTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACAT 63598 || || ||||||||||| ||||| ||| || ||| | | || || || | | Sbjct 124042 AGTATCGTAGATACCCTCAATGCTGTCAGCGCTCACATCGACCAGGAAGCAAGATGCAAG 123983 Query 63599 TTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTC 63658 ||| | | ||| | ||||| || | || ||||| ||||| || || | || | Sbjct 123982 CTGGGGCTGGGGAGTAGCGGCATTGAACAGAGTGGGAGAGGCGTGGGTGAAGTACTTCTG 123923 Query 63659 AGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGC 63718 || | | | ||| |||||||| || || |||||| || ||||| || || Sbjct 123922 GGACATCAAGTGGTATGTCTCAATGGCCCTCTCGATATCCTCGCCGTGGATTCCGACAGC 123863 Query 63719 GACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTA 63778 |||||||| | || ||||||||| | ||| | | ||| ||| || | | ||| Sbjct 123862 AACACGCATCAGCAAGTGCTGAGGACGCTCAGCAACATTGCCGTTAATGCGAAGAAGGTA 123803 Query 63779 GGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAAT 63838 || || | || || || || || ||||||| ||||| || ||||| | ||| Sbjct 123802 TGAACGCTCGAGGGTCTTGAATCCGAAGAAGTTGTAGTTGAAGTCACGGTCGTACACAAT 123743 Query 63839 AACCGAGTTGAGTTTATCCTTATATTTGTTAACTATATCCATGGTGATAC-TTGAAATAA 63897 |||||||||| | || | || | || || | | | || | | |||| || | Sbjct 123742 GGCCGAGTTGAGCTCCTCGGCGTGCTTCATTACAATCT-CGTAATGTTCCTTTGAGATCA 123684 Query 63898 TCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCAC 63957 | |||| | | || || || || || || |||| | | | ||| || || | Sbjct 123683 TAGGAGCAGGCTTATTGTTCTTGGGGTTCACGTAGTGGTACAGATCGGAGATGACCATAG 123624 Query 63958 TAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATGG 64017 ||| | ||||| |||| |||||| || || || ||||| || | || || ||||||| Sbjct 123623 AGAATTGCTTTTTAGTTTGCTTGTGGAGGTTCGAAACGGCGATACGTGCAGCCAGAATGG 123564 Query 64018 CATAATCCGGATGT 64031 | || || || ||| Sbjct 123563 CGTAGTCGGGGTGT 123550 >seq79 Length=198956 Score = 125 bits (138), Expect = 9e-24 Identities = 120/154 (78%), Gaps = 0/154 (0%) Strand=Plus/Minus Query 33295 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAA 33354 |||| || ||| ||||| || ||| |||||||| || | | || || |||||||| Sbjct 141341 AACAGCAGACAAGCGAAGTCAGTGTGGAGACCCTCATCACGAGAGATCAGCTCGTTGGAG 141282 Query 33355 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCA 33414 || ||||| || ||||| ||||||||||| || ||||| || ||||| |||||||| ||| Sbjct 141281 AAAGTGAGACCAGGCATCAGGCCACGCTTCTTGAGCCAGAAGATGGAGGCGAATGAGCCA 141222 Query 33415 GAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAA 33448 || |||||||| || || || || || ||||||| Sbjct 141221 GAGAAGAAGATACCCTCGACAGCGGCGAAGGCAA 141188 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622939444307360