Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20nordicum_20[genbank_20GCA_5F001278595.1_202015-09-03]
996 sequences; 30,844,022 total letters
Query= NC_006998.1
Length=194711
Score E
Sequences producing significant alignments: (Bits) Value
seq46 140 4e-28
seq79 125 9e-24
>seq46
Length=203589
Score = 140 bits (154), Expect = 4e-28
Identities = 731/1154 (63%), Gaps = 26/1154 (2%)
Strand=Plus/Minus
Query 62891 GGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTC 62950
||| | ||| ||||| || || || || ||||||| || | || | | |||||
Sbjct 124690 GGCGAGAGAAGCCAGGTTGCAGACAGCCACCTCATCAGGGGCACTGTACTCGACAATCTC 124631
Query 62951 AGTGCAAAGATTA---CTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTT 63007
|||||| || || |||| ||||| || | || | || |||||||| |||||
Sbjct 124630 AGTGCACAGGTTGGAGCTACGA---ATAGTACCCAGGTTCTTCTGGTTACTCTTCTTGTT 124574
Query 63008 ACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGC 63067
|| |||||||| || || || ||||| ||||||| ||| |||| | || | ||| ||
Sbjct 124573 GCAAGCATCCTTGTAGAGCATAAATGGGTTACCAGTCTCAGTCTGGGCCTCAAGAATGGC 124514
Query 63068 TTTCCAGACGACTC-GAGCCTTTATTATAGATTTGTATCT----CCTTTCTCTTTCGTA- 63121
| ||||| | || ||||||| || | ||| | |||| || | ||||
Sbjct 124513 GTACCAGA-GCTTCTGAGCCTTGATGGTC---TTGCGGCCACGGCCTTCCTGCT-CGTAC 124459
Query 63122 -TAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCAT 63180
| | ||| | | |||||||| || || | |||| ||| || || || |
Sbjct 124458 TTCGCGTAGAGAGCA--TCGAACTCATCGCCGTAGACATCAGCCAGACCGGGGGCCTCGT 124401
Query 63181 CCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAA 63240
|| || | | | ||| || |||| ||| || || ||||| |||||||| ||
Sbjct 124400 TGGGGCAGAAGAGGGTCCAGTCACCGTTGGCCTCAACACGCTTCATGAAGAGATCGGGGG 124341
Query 63241 TCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAA 63300
|||| | ||| || || || | | | | ||||| || || ||||| |
Sbjct 124340 TCCACAAAGCGTAGAAGAGGTCACGAGCGCGAACCTCCTCTTTACCGTGGTTCTTCCGCA 124281
Query 63301 GATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAG 63360
||||||||||| | | | ||| | |||||||| |||| ||| ||||| | | ||||
Sbjct 124280 GATCGAGGAACTCGAAGACATCGGCGTGCCACGGCTCCAGGTAGATGGCAAATGCACCAG 124221
Query 63361 GCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTG 63420
| || ||||| || ||||| || | || | || ||||| ||| | || | || ||| |
Sbjct 124220 GGCGCTTGTTACCACCCTGGTCGACATAGCGTGCAGTGTTGTTAAACACACGCAGCATAG 124161
Query 63421 GAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAATA- 63479
||| ||||||||| || || ||||| || || || || | || ||||||
Sbjct 124160 GAACAATACCGTTGGAGGAGCCGTTGGTTCCACCAATGTAAGAACCGGTAGCGCGAATAC 124101
Query 63480 -TTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAA 63538
| ||| ||||| || || || || | || ||||| | || ||| || |
Sbjct 124100 GGTGGACATT--CAGACCGATACCACCAGCGGTCTTGGAGATCATGGCACATGTCTTGAG 124043
Query 63539 CGTGTCATAGATACCCTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACAT 63598
|| || ||||||||||| ||||| ||| || ||| | | || || || | |
Sbjct 124042 AGTATCGTAGATACCCTCAATGCTGTCAGCGCTCACATCGACCAGGAAGCAAGATGCAAG 123983
Query 63599 TTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTC 63658
||| | | ||| | ||||| || | || ||||| ||||| || || | || |
Sbjct 123982 CTGGGGCTGGGGAGTAGCGGCATTGAACAGAGTGGGAGAGGCGTGGGTGAAGTACTTCTG 123923
Query 63659 AGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGC 63718
|| | | | ||| |||||||| || || |||||| || ||||| || ||
Sbjct 123922 GGACATCAAGTGGTATGTCTCAATGGCCCTCTCGATATCCTCGCCGTGGATTCCGACAGC 123863
Query 63719 GACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTA 63778
|||||||| | || ||||||||| | ||| | | ||| ||| || | | |||
Sbjct 123862 AACACGCATCAGCAAGTGCTGAGGACGCTCAGCAACATTGCCGTTAATGCGAAGAAGGTA 123803
Query 63779 GGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAAT 63838
|| || | || || || || || ||||||| ||||| || ||||| | |||
Sbjct 123802 TGAACGCTCGAGGGTCTTGAATCCGAAGAAGTTGTAGTTGAAGTCACGGTCGTACACAAT 123743
Query 63839 AACCGAGTTGAGTTTATCCTTATATTTGTTAACTATATCCATGGTGATAC-TTGAAATAA 63897
|||||||||| | || | || | || || | | | || | | |||| || |
Sbjct 123742 GGCCGAGTTGAGCTCCTCGGCGTGCTTCATTACAATCT-CGTAATGTTCCTTTGAGATCA 123684
Query 63898 TCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCAC 63957
| |||| | | || || || || || || |||| | | | ||| || || |
Sbjct 123683 TAGGAGCAGGCTTATTGTTCTTGGGGTTCACGTAGTGGTACAGATCGGAGATGACCATAG 123624
Query 63958 TAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATGG 64017
||| | ||||| |||| |||||| || || || ||||| || | || || |||||||
Sbjct 123623 AGAATTGCTTTTTAGTTTGCTTGTGGAGGTTCGAAACGGCGATACGTGCAGCCAGAATGG 123564
Query 64018 CATAATCCGGATGT 64031
| || || || |||
Sbjct 123563 CGTAGTCGGGGTGT 123550
>seq79
Length=198956
Score = 125 bits (138), Expect = 9e-24
Identities = 120/154 (78%), Gaps = 0/154 (0%)
Strand=Plus/Minus
Query 33295 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAA 33354
|||| || ||| ||||| || ||| |||||||| || | | || || ||||||||
Sbjct 141341 AACAGCAGACAAGCGAAGTCAGTGTGGAGACCCTCATCACGAGAGATCAGCTCGTTGGAG 141282
Query 33355 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCA 33414
|| ||||| || ||||| ||||||||||| || ||||| || ||||| |||||||| |||
Sbjct 141281 AAAGTGAGACCAGGCATCAGGCCACGCTTCTTGAGCCAGAAGATGGAGGCGAATGAGCCA 141222
Query 33415 GAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAA 33448
|| |||||||| || || || || || |||||||
Sbjct 141221 GAGAAGAAGATACCCTCGACAGCGGCGAAGGCAA 141188
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 622939444307360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |