Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20nordicum_20[genbank_20GCA_5F001278595.1_202015-09-03] 996 sequences; 30,844,022 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq670 132 3e-26 seq889 111 1e-19 seq601 95.1 8e-15 >seq670 Length=2071 Score = 132 bits (146), Expect = 3e-26 Identities = 85/93 (91%), Gaps = 5/93 (5%) Strand=Plus/Minus Query 25904 GCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGTTA 25958 |||||||||| ||||||||||||||||||||||||||||||| || |||||||||| Sbjct 1374 GCCCGTTCCCCTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTA 1315 Query 25959 ATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||| |||||||||||||||||||||||||||| Sbjct 1314 ATCCATTCATGCGCGTCACTAATTAGATGACGA 1282 >seq889 Length=211749 Score = 111 bits (122), Expect = 1e-19 Identities = 202/293 (69%), Gaps = 12/293 (4%) Strand=Plus/Plus Query 6201 TTCTACCGCTACAAAATGCCGCGCATCTGC--GCCAAGGTCGAGGGTAAGGGAAACGGTA 6258 ||||| |||||||| ||| | | | || | || ||||||||||| ||||| ||||||| Sbjct 28338 TTCTATCGCTACAAGATG--GAGAAGCTCCAGGCTAAGGTCGAGGGCAAGGGCAACGGTA 28395 Query 6259 TTAAAACCGTCATTGTCAACATGCCTGAAGTCGCTA----AGGCGCTCGGACGCCCTGCC 6314 |||| ||||| | |||||| ||||| ||| | || | ||| | || ||| | Sbjct 28396 TTAAGACCGTTGTCGTCAAC----CTGAACTCGGTTGCCCAGTCCCTCAGTCGGCCTCCT 28451 Query 6315 ACCTACCCGACGAAATATTTCGGGTGCGAACTTGGCGCTCAGACGCAGTTTGATCACAAA 6374 |||| | | || || ||||| | || ||||| || ||| | | | | | | Sbjct 28452 GCCTATCTCATCAAGTACTTCGGATTTGAGCTTGGTGCACAGGCCAACGCTAAGCCCTCT 28511 Query 6375 AACGAGCGCTTCATCGTTAACGGATCGCATAACTCTGCCAAGCTGCAGGACTTACTTGAC 6434 ||||||| | ||| | ||||| || || || | ||||||| ||||| | || ||| Sbjct 28512 GACGAGCGTTGGATCATCAACGGTTCTCACGACGCCCCCAAGCTCCAGGATTACCTCGAC 28571 Query 6435 GGCTTTATTCGCAAGTTTGTGCTGTGTCGGGAATGCGATAACCCGGAGACCGA 6487 ||||| || ||||||||||||||| | | ||| | ||||| |||||||| Sbjct 28572 GGCTTCATCTCCAAGTTTGTGCTGTGCAAGAAGTGCAAGAACCCCGAGACCGA 28624 >seq601 Length=120753 Score = 95.1 bits (104), Expect = 8e-15 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150 ||||| | | ||||||||||| || |||||| |||||| || || ||||| || || Sbjct 55591 CCACCACGAAGACGCAACACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCCGAA 55650 Query 38151 AAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGG 38210 | | |||| |||| || | || || || || || || ||||| || || || | || Sbjct 55651 AGAGTACGTCCGTCCTCCAGCTGCTTACCAGCGAAGATAAGGCGCTGCTGGTCAGGAGGA 55710 Query 38211 ACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACT 38270 | || || |||||| || || ||| ||||| | || ||| || || ||| Sbjct 55711 ATACCCTCCTTGTCCTGGATCTTGCTCTTGACATTATCGATAGTGTCGGATGACTCGACT 55770 Query 38271 TCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 || | ||||||||| || || || | || |||||||| |||||||| Sbjct 55771 TCAAGTGTAATAGTCTTGCCAGTGAGCGTCTTCACGAAAATCTGCAT 55817 Score = 89.7 bits (98), Expect = 3e-13 Identities = 157/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 ||||||| | | ||| | || | || || ||| |||||||||||| ||||| || | Sbjct 55817 TACCACCACGTAGACGAAGGACGAGGTGGAGGGTGGACTCCTTTTGAATGTTGTAGTCCG 55876 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 | | | |||| |||| || | || || || || || || || || || || |||| || Sbjct 55877 AAAGAGTACGTCCGTCTTCAAGCTGCTTGCCTGCGAAGATGAGACGCTGCTGGTCGGGGG 55936 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 | | ||| || || || ||| || ||||||||| | || || || || | Sbjct 55937 GAATGCCCTCCTTATCTTGAATCTTGGACTTCACATTATCGATGGTGTCGGATGACTCGA 55996 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 |||| | ||||||||| || || || | || |||||||| |||||||| Sbjct 55997 CTTCAAGTGTAATAGTCTTGCCAGTGAGCGTCTTCACGAAAATCTGCAT 56045 Score = 84.2 bits (92), Expect = 1e-11 Identities = 150/219 (68%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 ||||||| | | ||| | || | || || ||| |||||||||||| ||||| || | Sbjct 56045 TACCACCACGTAGACGAAGGACGAGGTGGAGGGTGGACTCCTTTTGAATGTTGTAGTCCG 56104 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 | | | |||| |||| || | || || || || || || || || || || |||| || Sbjct 56105 AAAGAGTACGTCCGTCCTCAAGCTGCTTGCCTGCGAAGATGAGACGCTGCTGGTCGGGGG 56164 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 ||| ||| || || ||| || || ||| ||||| | || |||||| | |||| Sbjct 56165 GGATGCCCTCCTTATCCTGGATCTTCGACTTAACATTGTCGATAGTATCGCTGGACTCAA 56224 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGA 38307 | || | || || ||||| || |||| ||| || |||| Sbjct 56225 CCTCAAGAGTGATGGTTTTCCCGGTCAGGGTCTTAACGA 56263 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334943134159676