Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20nordicum_20[genbank_20GCA_5F001278595.1_202015-09-03] 996 sequences; 30,844,022 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq46 122 1e-22 seq79 111 2e-19 >seq46 Length=203589 Score = 122 bits (134), Expect = 1e-22 Identities = 666/1054 (63%), Gaps = 26/1054 (2%) Strand=Plus/Minus Query 62846 TGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATC 62905 || |||||||| ||||| || |||||||| || || || ||||| ||||||| ||| || Sbjct 124590 TGGTTACTCTTCTTGTTGCAAGCATCCTTGTAGAGCATAAATGGGTTACCAGTCTCAGTC 124531 Query 62906 TGAGATTCTATAATCGCTTTCCAGACGACTC-GAGCCTTTATTATAGATTTGTATCT--- 62961 || | || | ||| || | ||||| | || ||||||| || | ||| | Sbjct 124530 TGGGCCTCAAGAATGGCGTACCAGA-GCTTCTGAGCCTTGATGGTC---TTGCGGCCACG 124475 Query 62962 -CTTTTCTCTTTCGTA--TAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTC 63018 | || || | |||| | | ||| | | |||||||| || || | |||| | Sbjct 124474 GCCTTCCTGCT-CGTACTTCGCGTAGAGAGCA--TCGAACTCATCGCCGTAGACATCAGC 124418 Query 63019 CAGTCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTT 63078 ||| || || || | || || | | | ||| || |||| ||| || || || Sbjct 124417 CAGACCGGGGGCCTCGTTGGGGCAGAAGAGGGTCCAGTCACCGTTGGCCTCAACACGCTT 124358 Query 63079 CATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTT 63138 ||| |||||||| || |||| | ||| || || || | | | | ||||| || Sbjct 124357 CATGAAGAGATCGGGGGTCCACAAAGCGTAGAAGAGGTCACGAGCGCGAACCTCCTCTTT 124298 Query 63139 TCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTA 63198 || ||||| |||||||||||| | | | ||| | |||||||| |||| ||| Sbjct 124297 ACCGTGGTTCTTCCGCAGATCGAGGAACTCGAAGACATCGGCGTGCCACGGCTCCAGGTA 124238 Query 63199 TATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATT 63258 ||||| | | ||||| || ||||| || ||||| || | || | || ||||| || Sbjct 124237 GATGGCAAATGCACCAGGGCGCTTGTTACCACCCTGGTCGACATAGCGTGCAGTGTTGTT 124178 Query 63259 ATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCTGAGATATAGCT 63318 | | || | || ||| |||| |||||| ||||| | || ||||| || || || Sbjct 124177 AAACACACGCAGCATAGGAACAATACCGTTGGAGGAGCCGTTGGTTCCACCAATGTAAGA 124118 Query 63319 TCCACTGGCACGAATA--TTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATT 63376 || | || |||||| | ||| ||||| || || || || | || ||||| Sbjct 124117 ACCGGTAGCGCGAATACGGTGGACATT--CAGACCGATACCACCAGCGGTCTTGGAGATC 124060 Query 63377 AATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGT 63436 | || ||| || | ||||| ||||| ||||| || || ||| | ||| | | Sbjct 124059 ATGGCACATGTCTTGAGAGTATCGTAGATACCCTCAATGCTGTCAGCGCTCACATCGACC 124000 Query 63437 AGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCG 63496 || || || | | ||| | | ||| | ||||| || | || ||||| ||| Sbjct 123999 AGGAAGCAAGATGCAAGCTGGGGCTGGGGAGTAGCGGCATTGAACAGAGTGGGAGAGGCG 123940 Query 63497 TGAGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCAT 63556 || || || | || | || | | | ||| |||||||| || || |||||| Sbjct 123939 TGGGTGAAGTACTTCTGGGACATCAAGTGGTATGTCTCAATGGCCCTCTCGATATCCTCG 123880 Query 63557 TGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTG 63616 || ||||| || || |||||||| | || ||||||||| | ||| | | ||| | Sbjct 123879 CCGTGGATTCCGACAGCAACACGCATCAGCAAGTGCTGAGGACGCTCAGCAACATTGCCG 123820 Query 63617 TTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAG 63676 || || | | ||| || || | || || || || || ||||||| ||| Sbjct 123819 TTAATGCGAAGAAGGTATGAACGCTCGAGGGTCTTGAATCCGAAGAAGTTGTAGTTGAAG 123760 Query 63677 TCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACATCCATG 63736 || || ||||| | ||| |||||||||| |||| | || | |||| | | Sbjct 123759 TCACGGTCGTACACAATGGCCGAGTTGAG---CTCCTCGGCGTGCTTCATTACAATC-TC 123704 Query 63737 GTAAT----ACTTGAAATAATAGGAAAATGTTTCCCATTTTTAGGATTGACATAGTTGAA 63792 ||||| |||| || |||||| | | || || || || || || |||| | | Sbjct 123703 GTAATGTTCCTTTGAGATCATAGGAGCAGGCTTATTGTTCTTGGGGTTCACGTAGTGGTA 123644 Query 63793 TAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGC 63852 | ||| || || | ||| | ||||| |||| ||||| || || || ||||| Sbjct 123643 CAGATCGGAGATGACCATAGAGAATTGCTTTTTAGTTTGCTTGTGGAGGTTCGAAACGGC 123584 Query 63853 TATTCTAGCGGCTAGAATGGCATAATCCGGATGT 63886 || | || || |||||||| || || || ||| Sbjct 123583 GATACGTGCAGCCAGAATGGCGTAGTCGGGGTGT 123550 >seq79 Length=198956 Score = 111 bits (122), Expect = 2e-19 Identities = 117/154 (76%), Gaps = 0/154 (0%) Strand=Plus/Minus Query 32652 AACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAA 32711 |||| || ||| ||||| || ||| |||||||| || | | || | |||||||| Sbjct 141341 AACAGCAGACAAGCGAAGTCAGTGTGGAGACCCTCATCACGAGAGATCAGCTCGTTGGAG 141282 Query 32712 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCA 32771 || ||||| || ||||| ||||||||||| || ||||| || ||||| || ||||| ||| Sbjct 141281 AAAGTGAGACCAGGCATCAGGCCACGCTTCTTGAGCCAGAAGATGGAGGCGAATGAGCCA 141222 Query 32772 GAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAA 32805 || ||||| || || || || || || ||||||| Sbjct 141221 GAGAAGAAGATACCCTCGACAGCGGCGAAGGCAA 141188 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633624111281600