Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20nordicum_20[genbank_20GCA_5F001278595.1_202015-09-03]
996 sequences; 30,844,022 total letters
Query= NC_008291.1
Length=198050
Score E
Sequences producing significant alignments: (Bits) Value
seq46 122 1e-22
seq79 111 2e-19
>seq46
Length=203589
Score = 122 bits (134), Expect = 1e-22
Identities = 666/1054 (63%), Gaps = 26/1054 (2%)
Strand=Plus/Minus
Query 62846 TGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATC 62905
|| |||||||| ||||| || |||||||| || || || ||||| ||||||| ||| ||
Sbjct 124590 TGGTTACTCTTCTTGTTGCAAGCATCCTTGTAGAGCATAAATGGGTTACCAGTCTCAGTC 124531
Query 62906 TGAGATTCTATAATCGCTTTCCAGACGACTC-GAGCCTTTATTATAGATTTGTATCT--- 62961
|| | || | ||| || | ||||| | || ||||||| || | ||| |
Sbjct 124530 TGGGCCTCAAGAATGGCGTACCAGA-GCTTCTGAGCCTTGATGGTC---TTGCGGCCACG 124475
Query 62962 -CTTTTCTCTTTCGTA--TAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTC 63018
| || || | |||| | | ||| | | |||||||| || || | |||| |
Sbjct 124474 GCCTTCCTGCT-CGTACTTCGCGTAGAGAGCA--TCGAACTCATCGCCGTAGACATCAGC 124418
Query 63019 CAGTCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTT 63078
||| || || || | || || | | | ||| || |||| ||| || || ||
Sbjct 124417 CAGACCGGGGGCCTCGTTGGGGCAGAAGAGGGTCCAGTCACCGTTGGCCTCAACACGCTT 124358
Query 63079 CATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTT 63138
||| |||||||| || |||| | ||| || || || | | | | ||||| ||
Sbjct 124357 CATGAAGAGATCGGGGGTCCACAAAGCGTAGAAGAGGTCACGAGCGCGAACCTCCTCTTT 124298
Query 63139 TCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTA 63198
|| ||||| |||||||||||| | | | ||| | |||||||| |||| |||
Sbjct 124297 ACCGTGGTTCTTCCGCAGATCGAGGAACTCGAAGACATCGGCGTGCCACGGCTCCAGGTA 124238
Query 63199 TATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATT 63258
||||| | | ||||| || ||||| || ||||| || | || | || ||||| ||
Sbjct 124237 GATGGCAAATGCACCAGGGCGCTTGTTACCACCCTGGTCGACATAGCGTGCAGTGTTGTT 124178
Query 63259 ATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCTGAGATATAGCT 63318
| | || | || ||| |||| |||||| ||||| | || ||||| || || ||
Sbjct 124177 AAACACACGCAGCATAGGAACAATACCGTTGGAGGAGCCGTTGGTTCCACCAATGTAAGA 124118
Query 63319 TCCACTGGCACGAATA--TTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATT 63376
|| | || |||||| | ||| ||||| || || || || | || |||||
Sbjct 124117 ACCGGTAGCGCGAATACGGTGGACATT--CAGACCGATACCACCAGCGGTCTTGGAGATC 124060
Query 63377 AATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGT 63436
| || ||| || | ||||| ||||| ||||| || || ||| | ||| | |
Sbjct 124059 ATGGCACATGTCTTGAGAGTATCGTAGATACCCTCAATGCTGTCAGCGCTCACATCGACC 124000
Query 63437 AGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCG 63496
|| || || | | ||| | | ||| | ||||| || | || ||||| |||
Sbjct 123999 AGGAAGCAAGATGCAAGCTGGGGCTGGGGAGTAGCGGCATTGAACAGAGTGGGAGAGGCG 123940
Query 63497 TGAGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCAT 63556
|| || || | || | || | | | ||| |||||||| || || ||||||
Sbjct 123939 TGGGTGAAGTACTTCTGGGACATCAAGTGGTATGTCTCAATGGCCCTCTCGATATCCTCG 123880
Query 63557 TGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTG 63616
|| ||||| || || |||||||| | || ||||||||| | ||| | | ||| |
Sbjct 123879 CCGTGGATTCCGACAGCAACACGCATCAGCAAGTGCTGAGGACGCTCAGCAACATTGCCG 123820
Query 63617 TTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAG 63676
|| || | | ||| || || | || || || || || ||||||| |||
Sbjct 123819 TTAATGCGAAGAAGGTATGAACGCTCGAGGGTCTTGAATCCGAAGAAGTTGTAGTTGAAG 123760
Query 63677 TCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACATCCATG 63736
|| || ||||| | ||| |||||||||| |||| | || | |||| | |
Sbjct 123759 TCACGGTCGTACACAATGGCCGAGTTGAG---CTCCTCGGCGTGCTTCATTACAATC-TC 123704
Query 63737 GTAAT----ACTTGAAATAATAGGAAAATGTTTCCCATTTTTAGGATTGACATAGTTGAA 63792
||||| |||| || |||||| | | || || || || || || |||| | |
Sbjct 123703 GTAATGTTCCTTTGAGATCATAGGAGCAGGCTTATTGTTCTTGGGGTTCACGTAGTGGTA 123644
Query 63793 TAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGC 63852
| ||| || || | ||| | ||||| |||| ||||| || || || |||||
Sbjct 123643 CAGATCGGAGATGACCATAGAGAATTGCTTTTTAGTTTGCTTGTGGAGGTTCGAAACGGC 123584
Query 63853 TATTCTAGCGGCTAGAATGGCATAATCCGGATGT 63886
|| | || || |||||||| || || || |||
Sbjct 123583 GATACGTGCAGCCAGAATGGCGTAGTCGGGGTGT 123550
>seq79
Length=198956
Score = 111 bits (122), Expect = 2e-19
Identities = 117/154 (76%), Gaps = 0/154 (0%)
Strand=Plus/Minus
Query 32652 AACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAA 32711
|||| || ||| ||||| || ||| |||||||| || | | || | ||||||||
Sbjct 141341 AACAGCAGACAAGCGAAGTCAGTGTGGAGACCCTCATCACGAGAGATCAGCTCGTTGGAG 141282
Query 32712 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCA 32771
|| ||||| || ||||| ||||||||||| || ||||| || ||||| || ||||| |||
Sbjct 141281 AAAGTGAGACCAGGCATCAGGCCACGCTTCTTGAGCCAGAAGATGGAGGCGAATGAGCCA 141222
Query 32772 GAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAA 32805
|| ||||| || || || || || || |||||||
Sbjct 141221 GAGAAGAAGATACCCTCGACAGCGGCGAAGGCAA 141188
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 633624111281600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |