Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20nordicum_20[genbank_20GCA_5F001278595.1_202015-09-03] 996 sequences; 30,844,022 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq601 105 6e-18 seq243 84.2 2e-11 seq183 82.4 6e-11 >seq601 Length=120753 Score = 105 bits (116), Expect = 6e-18 Identities = 135/186 (73%), Gaps = 0/186 (0%) Strand=Plus/Minus Query 22231 GTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGAC 22290 ||||| || | ||||| ||||| |||||||||| || || ||| |||||| | ||| Sbjct 56261 GTTAAGACCCTGACCGGGAAAACCATCACTCTTGAGGTTGAGTCCAGCGATACTATCGAC 56202 Query 22291 GATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATA 22350 || | || || || || || |||||||| || || ||||| || || ||||| || Sbjct 56201 AATGTTAAGTCGAAGATCCAGGATAAGGAGGGCATCCCCCCCGACCAGCAGCGTCTCATC 56142 Query 22351 TTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAA 22410 || || ||||| ||| | ||||| || || | || || |||||||||||||| || Sbjct 56141 TTCGCAGGCAAGCAGCTTGAGGACGGACGTACTCTTTCGGACTACAACATTCAAAAGGAG 56082 Query 22411 TCCACC 22416 |||||| Sbjct 56081 TCCACC 56076 Score = 100 bits (110), Expect = 2e-16 Identities = 141/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| ||||| || || || | || || || || | || |||||||| || | || Sbjct 56045 ATGCAGATTTTCGTGAAGACGCTCACTGGCAAGACTATTACACTTGAAGTCGAGTCATCC 55986 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | || || | || || |||||||| |||||||| ||||| ||||| || Sbjct 55985 GACACCATCGATAATGTGAAGTCCAAGATTCAAGATAAGGAGGGCATTCCCCCCGACCAG 55926 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || || || ||||| ||| | || || || || | || || |||||| Sbjct 55925 CAGCGTCTCATCTTCGCAGGCAAGCAGCTTGAAGACGGACGTACTCTTTCGGACTACAAC 55866 Query 22399 ATTCAAAAAGAATCCACC 22416 |||||||| || |||||| Sbjct 55865 ATTCAAAAGGAGTCCACC 55848 Score = 86.0 bits (94), Expect = 5e-12 Identities = 148/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| ||||| || || || | || || || || | || |||||||| || | || Sbjct 55817 ATGCAGATTTTCGTGAAGACGCTCACTGGCAAGACTATTACACTTGAAGTCGAGTCATCC 55758 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || || |||| || || || ||||||||||||||||| || || || Sbjct 55757 GACACTATCGATAATGTCAAGAGCAAGATCCAGGACAAGGAGGGTATTCCTCCTGACCAG 55698 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || ||||| || || || || ||| | ||||| || || | || || |||||| Sbjct 55697 CAGCGCCTTATCTTCGCTGGTAAGCAGCTGGAGGACGGACGTACTCTTTCGGACTACAAC 55638 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCG 22433 || || || || ||||| | || | || ||||| Sbjct 55637 ATCCAGAAGGAGTCCACTCTCCACCTGGTGTTGCG 55603 >seq243 Length=29033 Score = 84.2 bits (92), Expect = 2e-11 Identities = 82/106 (77%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 22311 AGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGA 22370 |||||||||||||||||| || || || || || || || || |||||||| ||| | || Sbjct 22710 AGACAAGGAGGGTATTCCCCCTGACCAGCAGCGCCTGATCTTCGCCGGCAAGCAGCTCGA 22769 Query 22371 GGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACC 22416 ||| |||||| | || ||||||||||| || || || || ||| Sbjct 22770 GGACGGCCGCACTCTTTCGGATTACAACATCCAGAAGGAGTCGACC 22815 >seq183 Length=38727 Score = 82.4 bits (90), Expect = 6e-11 Identities = 126/180 (70%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 22227 TTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGT 22286 ||| || || || | || ||||| || | || || || || || | | ||| ||| | Sbjct 24954 TTTCGTCAAGACCCTGACGGGTAAGACCATTACCCTCGATGTCGAGTCGAGCGACACCAT 24895 Query 22287 GGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCT 22346 ||| | |||| || || || ||||||||||| || || ||||| || || ||||| Sbjct 24894 CGACAACGTCAAGACCAAGATCCAGGACAAGGAGGGCATCCCCCCCGACCAGCAGCGTCT 24835 Query 22347 TATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAA 22406 || || ||||| || ||| | |||||| ||||||| | ||| |||||||| || || Sbjct 24834 GATCTTCGCCGGAAAGCAGCTCGAGGATGGCCGCACCCTGAGCGACTACAACATCCAGAA 24775 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419722905026740