Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20nordicum_20[genbank_20GCA_5F001278595.1_202015-09-03]
996 sequences; 30,844,022 total letters
Query= NC_008603.1
Length=321240
Score E
Sequences producing significant alignments: (Bits) Value
seq79 159 7e-34
seq201 104 5e-17
>seq79
Length=198956
Score = 159 bits (176), Expect = 7e-34
Identities = 282/405 (70%), Gaps = 12/405 (3%)
Strand=Plus/Minus
Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622
|||||||| || | |||||| |||| ||||| ||||||||||||||||||||| ||
Sbjct 141599 TCGAAGAAGTTGGTCTTGCCAGCCAGGGAGATGGACTCCATGAAGTCGAAGGGGTTGGTA 141540
Query 251623 GCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCCAGA 251682
|| ||||| | ||| | ||| || || || | | |||||| || || ||||| |
Sbjct 141539 GCGTTGTAGTACTTCTTGTTGCCGAGGGCCACCAGCAGGCGGTCAGCGACGAACTCGATG 141480
Query 251683 TACTGTCCCATCAGTTCAGAGTTCATGCCAATCATACGACAAGGAATTGCCTCACAGATG 251742
|||| | |||||| | ||||||||||||| || || ||| |||| || ||| | |
Sbjct 141479 TACTCGCACATCAGCTTGGAGTTCATGCCAAGCAGACCACAGGGAAGAGCGTCAGTCAGG 141420
Query 251743 AATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCTTCACC----TGTGCCAGAGA 251798
|| |||| ||| || | || ||||| | | || |||| ||| || | | |
Sbjct 141419 AACTCCTGCTCGATGCCGACGGCCTCGACAATGATAGCCTCAACCATCTTGGGGTCGGGG 141360
Query 251799 CAGCTTGTTCTCCAGCTTTGAGTACAGGAG-CTCGCCAA-ACTGTTGGTGCAGACCCTCG 251856
| | | ||| || | ||| |||| || | || || | || ||| ||||||||
Sbjct 141359 C-GGTGGTT---CATGTGGGAGAACAGCAGACAAGCGAAGTCAGT--GTGGAGACCCTCA 141306
Query 251857 TCGCGACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCCTGAGC 251916
|| ||| ||| | ||||||||| | | || |||||||||| ||||| ||| |||||
Sbjct 141305 TCACGAGAGATCAGCTCGTTGGAGAAAGTGAGACCAGGCATCAGGCCACGCTTCTTGAGC 141246
Query 251917 CAGAAGATTGCGCAAAAGGATCCAGAGAACAGCAGACCCTCGACA 251961
|||||||| | | || || |||||||| | | ||||||||||
Sbjct 141245 CAGAAGATGGAGGCGAATGAGCCAGAGAAGAAGATACCCTCGACA 141201
>seq201
Length=169825
Score = 104 bits (114), Expect = 5e-17
Identities = 156/222 (70%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 279344 AGGTGAGGATCTGTGTGACTGTGATTTCTCGCTCGCATATGGTGGGAAGATTCTGCTAAA 279403
||||| || || || |||| |||||| || || || |||| ||||||||||| ||
Sbjct 41889 AGGTGTCGACCTTTGCAACTGCACTTTCTCCCTGGCCTACGGTGCCAAGATTCTGCTGAA 41830
Query 279404 CTCTACCCGCCTCAACATCAAGCGTGGCAACCGGTATGGTCTCATCGGTCCCAATGGAGC 279463
| || | ||| | |||||||||| | || || |||||| |||||||||| || |
Sbjct 41829 CCAGACTCACCTGCGCCTCAAGCGTGGTCAGCGTTACGGTCTCCTCGGTCCCAACGGTTC 41770
Query 279464 GGGTAAGAGCACTCTAATGCGCGCCATTGCAAACGGTCAGCTGGAAGGATTTCCTAACGC 279523
|| |||| ||| || ||||| || || |||| ||||| || || || || ||
Sbjct 41769 CGGAAAGACCACCCTCATGCGTGCTATCAACAACGAGCAGCTCGAGGGTTTCCCCAAGAA 41710
Query 279524 ATCTGAGGTAAGGACAGTGTATGTAGAGCACGACATCGACTC 279565
|||||| | ||| || || || |||||||| |||||||
Sbjct 41709 GGATGAGGTCAAGACCGTCTACGTCGAGCACGATCTCGACTC 41668
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1027823683517636
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |