Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20nordicum_20[genbank_20GCA_5F001278595.1_202015-09-03] 996 sequences; 30,844,022 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq79 159 7e-34 seq201 104 5e-17 >seq79 Length=198956 Score = 159 bits (176), Expect = 7e-34 Identities = 282/405 (70%), Gaps = 12/405 (3%) Strand=Plus/Minus Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622 |||||||| || | |||||| |||| ||||| ||||||||||||||||||||| || Sbjct 141599 TCGAAGAAGTTGGTCTTGCCAGCCAGGGAGATGGACTCCATGAAGTCGAAGGGGTTGGTA 141540 Query 251623 GCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCCAGA 251682 || ||||| | ||| | ||| || || || | | |||||| || || ||||| | Sbjct 141539 GCGTTGTAGTACTTCTTGTTGCCGAGGGCCACCAGCAGGCGGTCAGCGACGAACTCGATG 141480 Query 251683 TACTGTCCCATCAGTTCAGAGTTCATGCCAATCATACGACAAGGAATTGCCTCACAGATG 251742 |||| | |||||| | ||||||||||||| || || ||| |||| || ||| | | Sbjct 141479 TACTCGCACATCAGCTTGGAGTTCATGCCAAGCAGACCACAGGGAAGAGCGTCAGTCAGG 141420 Query 251743 AATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCTTCACC----TGTGCCAGAGA 251798 || |||| ||| || | || ||||| | | || |||| ||| || | | | Sbjct 141419 AACTCCTGCTCGATGCCGACGGCCTCGACAATGATAGCCTCAACCATCTTGGGGTCGGGG 141360 Query 251799 CAGCTTGTTCTCCAGCTTTGAGTACAGGAG-CTCGCCAA-ACTGTTGGTGCAGACCCTCG 251856 | | | ||| || | ||| |||| || | || || | || ||| |||||||| Sbjct 141359 C-GGTGGTT---CATGTGGGAGAACAGCAGACAAGCGAAGTCAGT--GTGGAGACCCTCA 141306 Query 251857 TCGCGACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCCTGAGC 251916 || ||| ||| | ||||||||| | | || |||||||||| ||||| ||| ||||| Sbjct 141305 TCACGAGAGATCAGCTCGTTGGAGAAAGTGAGACCAGGCATCAGGCCACGCTTCTTGAGC 141246 Query 251917 CAGAAGATTGCGCAAAAGGATCCAGAGAACAGCAGACCCTCGACA 251961 |||||||| | | || || |||||||| | | |||||||||| Sbjct 141245 CAGAAGATGGAGGCGAATGAGCCAGAGAAGAAGATACCCTCGACA 141201 >seq201 Length=169825 Score = 104 bits (114), Expect = 5e-17 Identities = 156/222 (70%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 279344 AGGTGAGGATCTGTGTGACTGTGATTTCTCGCTCGCATATGGTGGGAAGATTCTGCTAAA 279403 ||||| || || || |||| |||||| || || || |||| ||||||||||| || Sbjct 41889 AGGTGTCGACCTTTGCAACTGCACTTTCTCCCTGGCCTACGGTGCCAAGATTCTGCTGAA 41830 Query 279404 CTCTACCCGCCTCAACATCAAGCGTGGCAACCGGTATGGTCTCATCGGTCCCAATGGAGC 279463 | || | ||| | |||||||||| | || || |||||| |||||||||| || | Sbjct 41829 CCAGACTCACCTGCGCCTCAAGCGTGGTCAGCGTTACGGTCTCCTCGGTCCCAACGGTTC 41770 Query 279464 GGGTAAGAGCACTCTAATGCGCGCCATTGCAAACGGTCAGCTGGAAGGATTTCCTAACGC 279523 || |||| ||| || ||||| || || |||| ||||| || || || || || Sbjct 41769 CGGAAAGACCACCCTCATGCGTGCTATCAACAACGAGCAGCTCGAGGGTTTCCCCAAGAA 41710 Query 279524 ATCTGAGGTAAGGACAGTGTATGTAGAGCACGACATCGACTC 279565 |||||| | ||| || || || |||||||| ||||||| Sbjct 41709 GGATGAGGTCAAGACCGTCTACGTCGAGCACGATCTCGACTC 41668 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027823683517636