Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20nordicum_20[genbank_20GCA_5F001278595.1_202015-09-03]
996 sequences; 30,844,022 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq601 158 2e-33
seq79 141 2e-28
seq183 132 9e-26
seq201 100 5e-16
seq223 86.0 1e-11
>seq601
Length=120753
Score = 158 bits (174), Expect = 2e-33
Identities = 171/227 (75%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || || || || | || | ||| || |||||||| ||||| ||||| || || ||
Sbjct 55819 CCACCACGTAGACGAAGGACGAGGTGGAGGGTGGACTCCTTTTGAATGTTGTAGTCCGAA 55878
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | || ||||| | |||||| || ||||| ||||| | || |||||||| |||
Sbjct 55879 AGAGTACGTCCGTCTTCAAGCTGCTTGCCTGCGAAGATGAGACGCTGCTGGTCGGGGGGA 55938
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
||||| ||||| ||||||||||| | ||| || ||||||||||| | ||| || |||
Sbjct 55939 ATGCCCTCCTTATCTTGAATCTTGGACTTCACATTATCGATGGTGTCGGATGACTCGACT 55998
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| | || || || || || ||||| ||||| ||||| ||||||||
Sbjct 55999 TCAAGTGTAATAGTCTTGCCAGTGAGCGTCTTCACGAAAATCTGCAT 56045
Score = 120 bits (132), Expect = 6e-22
Identities = 159/218 (73%), Gaps = 2/218 (1%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || || || || | || | ||| || |||||||| ||||| ||||| || || ||
Sbjct 56047 CCACCACGTAGACGAAGGACGAGGTGGAGGGTGGACTCCTTTTGAATGTTGTAGTCCGAA 56106
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | || || || | |||||| || ||||| ||||| | || |||||||| ||
Sbjct 56107 AGAGTACGTCCGTCCTCAAGCTGCTTGCCTGCGAAGATGAGACGCTGCTGGTCGGGGGGG 56166
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTG-ATTCTAC 68413
||||| ||||| || || ||||| | ||| || ||||| || || |||| | || ||
Sbjct 56167 ATGCCCTCCTTATCCTGGATCTTCGACTTAACATTGTCGATAGTATC-GCTGGACTCAAC 56225
Query 68414 TTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGA 68451
|| | ||||||||||| || || |||||||| ||||
Sbjct 56226 CTCAAGAGTGATGGTTTTCCCGGTCAGGGTCTTAACGA 56263
>seq79
Length=198956
Score = 141 bits (156), Expect = 2e-28
Identities = 300/444 (68%), Gaps = 18/444 (4%)
Strand=Plus/Minus
Query 9935 CATGACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTC 9994
|||||| || ||||||||||| || || || |||||||||||||| |||||| |
Sbjct 141636 CATGACACCAGCCTTCTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCAGC 141577
Query 9995 GAGGGAAATGAGCTCCATGAAGTCAAAGGGGTTCTCGGCGCCAAACTGCTTGGGGTAACC 10054
||||| ||| |||||||||||| |||||||| ||| | | ||| || ||
Sbjct 141576 CAGGGAGATGGACTCCATGAAGTCGAAGGGGTTGGTAGCGTTGTAGTACTTCTTGTTGCC 141517
Query 10055 GAGTGCTGTGAAAATGCGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCGAGTT 10114
||| || | | ||||||||| |||||||||||||||| || |||||| | |||||
Sbjct 141516 GAGGGCCACCAGCAGGCGGTCAGCGACGAACTCGATGTACTCGCACATCAGCTTGGAGTT 141457
Query 10115 CATGCCAATCATGCGGCAGGGGATGGCGTCGCAAATGAAGTCCTTTTCGTTGGCGACCGC 10174
|||||||| || | ||||| | ||||| | ||| |||| ||| || |||| |
Sbjct 141456 CATGCCAAGCAGACCACAGGGAAGAGCGTCAGTCAGGAACTCCTGCTCGATGCCGACGG- 141398
Query 10175 TTCCTCGACGATGCT---CTTTACCA------CGTCAAGGGACAGCTTGTTCTCGAGCTT 10225
||||||| ||| | || |||| ||| ||| | | | |||| | |
Sbjct 141397 --CCTCGACAATGATAGCCTCAACCATCTTGGGGTC--GGGGC-GGTGGTTC---ATGTG 141346
Query 10226 CGAATACAGGAGCTCTCCAAACTGCTGGTGGAGGCCCTCGTCGCGGCTGATGAACTCGTT 10285
|| |||| || | || | |||||| ||||| || || ||| | ||||||
Sbjct 141345 GGAGAACAGCAGACAAGCGAAGTCAGTGTGGAGACCCTCATCACGAGAGATCAGCTCGTT 141286
Query 10286 GGACAAACCCAGACCGGGCATGAGCCCCCGGTTGCGCAGCCAGAAAATGGCGCAGAACGA 10345
||| ||| ||||| ||||| || || || || |||||||| |||| | ||| ||
Sbjct 141285 GGAGAAAGTGAGACCAGGCATCAGGCCACGCTTCTTGAGCCAGAAGATGGAGGCGAATGA 141226
Query 10346 CCCGGAGAACAGAAGACCCTCCAC 10369
|| ||||| | | |||||| ||
Sbjct 141225 GCCAGAGAAGAAGATACCCTCGAC 141202
Score = 89.7 bits (98), Expect = 9e-13
Identities = 118/164 (72%), Gaps = 0/164 (0%)
Strand=Plus/Minus
Query 10623 AGGTTCTCCATCACCATGCCATCGCTGCCTGCAAAGAAGCCGAGGATGTGCTTGATGAAG 10682
|||||||| | || ||||||||| | | || ||||| | |||| ||| |||||||
Sbjct 140888 AGGTTCTCGTTGACAATGCCATCGGAGGCGGCGAAGAAAGCCAGGACGTGGGAGATGAAG 140829
Query 10683 TGGCGCTCATCATCGTTCAGTTTTTCACGCCAGTCTACCACATCCTGGTTGAGCTGGACC 10742
| |||||||| |||||||| | ||||||| | ||||| | ||| | | |
Sbjct 140828 TAACGCTCATCGTCGTTCAGGCGGTTGTGCCAGTCGTGAAGATCCTTGGAGAGATCAATC 140769
Query 10743 TCCTCCACGGTCCAGAAAGTGGCAACGGCCTTCTTGTACATCTG 10786
|| || | |||||||||| ||| |||||||||||||||| ||
Sbjct 140768 TCTTCGGCAGTCCAGAAAGAGGCTTCGGCCTTCTTGTACATTTG 140725
>seq183
Length=38727
Score = 132 bits (146), Expect = 9e-26
Identities = 139/180 (77%), Gaps = 2/180 (1%)
Strand=Plus/Plus
Query 68274 TTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATG 68333
|| |||||||| || ||| || || | ||||| || | |||||| |||||||| ||
Sbjct 24775 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGATC 24834
Query 68334 AGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCG 68393
|| | || |||||||| || ||||| |||||||| || ||||| | ||||||| |||
Sbjct 24835 AGACGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGTCG 24894
Query 68394 ATGGTGTCTGCT-GATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAA 68452
|||||||| ||| || || || || | ||| ||||| || ||||| ||||||||||||||
Sbjct 24895 ATGGTGTC-GCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 24953
>seq201
Length=169825
Score = 100 bits (110), Expect = 5e-16
Identities = 153/218 (70%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 225779 TCGTGGTCCACGTACACCGTCCGGAGCTGAGAAGCATCGGGGAAGCCCTCCAGCTGGCCA 225838
||||| || ||||| || ||| || || | | |||||| ||||| ||||| |
Sbjct 41677 TCGTGCTCGACGTAGACGGTCTTGACCTCATCCTTCTTGGGGAAACCCTCGAGCTGCTCG 41736
Query 225839 TTTGCAATCGCACGGAGCAGGGTACTCTTGCCCGCGCCGTTGGGACCGATGAGGCCGTAA 225898
|| || ||||| | ||||| |||| || | ||||||||||||| ||| ||||||
Sbjct 41737 TTGTTGATAGCACGCATGAGGGTGGTCTTTCCGGAACCGTTGGGACCGAGGAGACCGTAA 41796
Query 225899 TGATTCCCGCGCTTGATGTTGAGGCGCGTGGAGTTCAGGAGGATCTTGCCACCATAGGCA 225958
| | || ||||||| | ||| | || |||||| || |||||| |||| |||||
Sbjct 41797 CGCTGACCACGCTTGAGGCGCAGGTGAGTCTGGTTCAGCAGAATCTTGGCACCGTAGGCC 41856
Query 225959 AGGGAGAACTCGCAATCGCACAGGTCCTCACCCTCCTC 225996
|||||||| ||| | ||| ||||| |||| || ||
Sbjct 41857 AGGGAGAAAGTGCAGTTGCAAAGGTCGACACCTTCTTC 41894
>seq223
Length=277266
Score = 86.0 bits (94), Expect = 1e-11
Identities = 112/155 (72%), Gaps = 0/155 (0%)
Strand=Plus/Plus
Query 224504 CCAAGCGACTCGCGGTCAAGGAAGTTCGTCGGCTCATCCAGGATGATAACGTGGGGGCAC 224563
|| ||||| || || || | |||||| |||||||| ||||||| | | |||||||
Sbjct 125560 CCGAGCGAGTCACGATCCAAGAAGTTAGTCGGCTCGTCCAGGACCAGCAGGTGGGGGTTG 125619
Query 224564 TGCCACAGGGCTGCACCAACCACCAGCTTCACCTTCTGACCGCCAGAGAGGCCGCGGATC 224623
| ||||| ||| || ||| ||| | ||| ||||||||||| ||||| || ||| ||||
Sbjct 125620 TTCCACATGGCACCAGCAAGCACGACCTTGACCTTCTGACCACCAGAAAGACCGGAGATC 125679
Query 224624 CGCGAGTGAGTCGTGAATTCGGGGTCAAGACCAAT 224658
||| | | || |||||||| | ||||||
Sbjct 125680 TCGTTGTGGTTGGCGATCTCGGGGTCCATACCAAT 125714
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 921610925801120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |