Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20nordicum_20[genbank_20GCA_5F001278595.1_202015-09-03] 996 sequences; 30,844,022 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq601 134 3e-26 seq183 116 9e-21 >seq601 Length=120753 Score = 134 bits (148), Expect = 3e-26 Identities = 160/217 (74%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | ||| ||||| || | ||| || ||||| || || ||||| | Sbjct 56047 CCACCACGTAGACGAAGGACGAGGTGGAGGGTGGACTCCTTTTGAATGTTGTAGTCCGAA 56106 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || |||||||| || | || || ||||||||||| |||||||| || ||| Sbjct 56107 AGAGTACGTCCGTCCTCAAGCTGCTTGCCTGCGAAGATGAGACGCTGCTGGTCGGGGGGG 56166 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || ||||||||||| |||| || || || || |||| |||||| || || || Sbjct 56167 ATGCCCTCCTTATCCTGGATCTTCGACTTAACATTGTCGATAGTATCGCTGGACTCAACC 56226 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGA 288463 || || ||||| || ||||||||||| ||||| |||| Sbjct 56227 TCAAGAGTGATGGTTTTCCCGGTCAGGGTCTTAACGA 56263 Score = 118 bits (130), Expect = 3e-21 Identities = 148/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | ||| ||||| || | || || || ||||| || ||||| | Sbjct 56333 CCACCACGGAGGCGAAGCACGAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCCGAA 56392 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || |||||||| || | || || ||||||||||| |||||||| || ||| Sbjct 56393 AGAGTACGTCCGTCCTCAAGCTGCTTGCCTGCGAAGATGAGACGCTGCTGGTCGGGGGGG 56452 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || ||||||||||| |||| || ||||| || |||| |||||| || || || Sbjct 56453 ATGCCCTCCTTATCCTGGATCTTCGACTTAACGTTGTCGATAGTATCGCTGGACTCGACC 56512 Query 288427 TCGAGCGTGATCGTCTTCCCGGT 288449 || || ||||| ||||| || || Sbjct 56513 TCAAGGGTGATGGTCTTGCCAGT 56535 Score = 114 bits (126), Expect = 3e-20 Identities = 164/230 (71%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | ||| ||||| || | ||| || ||||| || || ||||| | Sbjct 55819 CCACCACGTAGACGAAGGACGAGGTGGAGGGTGGACTCCTTTTGAATGTTGTAGTCCGAA 55878 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || ||||||||||| | || || ||||||||||| |||||||| || || ||| Sbjct 55879 AGAGTACGTCCGTCTTCAAGCTGCTTGCCTGCGAAGATGAGACGCTGCTG---GTCGGGG 55935 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 || || || ||||| || || || | ||||| || || || | ||| || || Sbjct 55936 GGAATGCCCTCCTTATCTTGAATCTTGGACTTCACATTATCGATGGTGTCGGATGACTCG 55995 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| || || || ||||| || || || ||||| ||||| |||||||| Sbjct 55996 ACTTCAAGTGTAATAGTCTTGCCAGTGAGCGTCTTCACGAAAATCTGCAT 56045 >seq183 Length=38727 Score = 116 bits (128), Expect = 9e-21 Identities = 133/179 (74%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 288286 TTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATC 288345 || ||||| || |||||| || ||||| || || || | || ||||| ||||||||| Sbjct 24775 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGATC 24834 Query 288346 AGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCT 288405 |||||||| || ||||| || || || |||||||| || | || ||||| || Sbjct 24835 AGACGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGTCG 24894 Query 288406 ATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAA 288464 || | |||||||| || || ||||| || || ||||| || ||||| ||||||||||| Sbjct 24895 ATGGTGTCGCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 24953 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179639346135288