Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20nordicum_20[genbank_20GCA_5F001278595.1_202015-09-03]
996 sequences; 30,844,022 total letters
Query= NC_010276.1
Length=156179
Score E
Sequences producing significant alignments: (Bits) Value
seq601 109 5e-19
seq243 93.3 4e-14
>seq601
Length=120753
Score = 109 bits (120), Expect = 5e-19
Identities = 152/213 (71%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290
||| || || || | || || || |||||||||||||| || | | || || ||||
Sbjct 55833 AAGGACGAGGTGGAGGGTGGACTCCTTTTGAATGTTGTAGTCCGAAAGAGTACGTCCGTC 55892
Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350
||||||||||||||| || | ||||| |||||||||||||| ||||| || || || ||
Sbjct 55893 TTCAAGCTGCTTGCCTGCGAAGATGAGACGCTGCTGGTCGGGGGGAATGCCCTCCTTATC 55952
Query 64351 TTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410
||| || || ||| ||| || | || || | || ||||| | || | ||
Sbjct 55953 TTGAATCTTGGACTTCACATTATCGATGGTGTCGGATGACTCGACTTCAAGTGTAATAGT 56012
Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
|||||| || | || || |||||||| |||||
Sbjct 56013 CTTGCCAGTGAGCGTCTTCACGAAAATCTGCAT 56045
Score = 100 bits (110), Expect = 3e-16
Identities = 144/203 (71%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290
||| || || || | || || || |||||||||||||| || | | || || ||||
Sbjct 56061 AAGGACGAGGTGGAGGGTGGACTCCTTTTGAATGTTGTAGTCCGAAAGAGTACGTCCGTC 56120
Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350
|||||||||||||| || | ||||| |||||||||||||| || || || || || ||
Sbjct 56121 CTCAAGCTGCTTGCCTGCGAAGATGAGACGCTGCTGGTCGGGGGGGATGCCCTCCTTATC 56180
Query 64351 TTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410
|| || || ||| ||| || | ||||| | || || || || | ||| | |||
Sbjct 56181 CTGGATCTTCGACTTAACATTGTCGATAGTATCGCTGGACTCAACCTCAAGAGTGATGGT 56240
Query 64411 CTTGCCGGTCAAAGTTTTTACGA 64433
|| ||||||| || || ||||
Sbjct 56241 TTTCCCGGTCAGGGTCTTAACGA 56263
Score = 84.2 bits (92), Expect = 2e-11
Identities = 132/189 (70%), Gaps = 0/189 (0%)
Strand=Plus/Plus
Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290
|||||| || || | || || || || || |||||||| || | | || || ||||
Sbjct 56347 AAGCACGAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTACGTCCGTC 56406
Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350
|||||||||||||| || | ||||| |||||||||||||| || || || || || ||
Sbjct 56407 CTCAAGCTGCTTGCCTGCGAAGATGAGACGCTGCTGGTCGGGGGGGATGCCCTCCTTATC 56466
Query 64351 TTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410
|| || || ||| || || | ||||| | || || || || | || | |||
Sbjct 56467 CTGGATCTTCGACTTAACGTTGTCGATAGTATCGCTGGACTCGACCTCAAGGGTGATGGT 56526
Query 64411 CTTGCCGGT 64419
|||||| ||
Sbjct 56527 CTTGCCAGT 56535
>seq243
Length=29033
Score = 93.3 bits (102), Expect = 4e-14
Identities = 104/139 (75%), Gaps = 0/139 (0%)
Strand=Plus/Minus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
||| || |||| | ||| || || |||| ||||| || || || ||||||||||| |
Sbjct 22845 ACCACCACGCAGGCGAAGGACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAATCCGA 22786
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
| ||||| |||| || |||||||||||||| | || || ||||||||||| || ||
Sbjct 22785 AAGAGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCAGGGGG 22726
Query 64336 AATTCCTTCTTTTTCTTGT 64354
||| || || || ||| ||
Sbjct 22725 AATACCCTCCTTGTCTGGT 22707
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 499638579422240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |