Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20nordicum_20[genbank_20GCA_5F001278595.1_202015-09-03] 996 sequences; 30,844,022 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq79 147 2e-30 seq601 96.9 3e-15 seq183 96.9 3e-15 >seq79 Length=198956 Score = 147 bits (162), Expect = 2e-30 Identities = 353/527 (67%), Gaps = 33/527 (6%) Strand=Plus/Plus Query 52326 GTGCCGTGCGTTCGCAAAAAGGCTCAGTGGGCAATGAAGTGGATCGAGAGCGACACCG-- 52383 || || ||| || ||| ||||| | ||||| | ||||||||| | |||| || Sbjct 141109 GTTCCCTGCATTGCCAAGAAGGCCAACTGGGCCCTCAAGTGGATCAA---CGACCGCGAG 141165 Query 52384 -CCACGCTGGCCGAGCGCATGGTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCCGGC 52442 | || | || ||| |||| ||||||||| |||||||| | || || || ||| Sbjct 141166 TCAACCTTCGCTTCGCGTCTGGTTGCCTTCGCCGCTGTCGAGGGTATCTTCTTCTCTGGC 141225 Query 52443 AGCTTTGCCGCCATCTTTTACATTAAAACGAAAGGCATAATGCCCGGCCTGACGTTCAGC 52502 || ||| ||||||| | | || | | ||| | ||||| || || || ||| | Sbjct 141226 TCATTCGCCTCCATCTTCTGGCTCAAGAAGCGTGGCCTGATGCCTGGTCTCACTTTCTCC 141285 Query 52503 AACGAGTTGATATCGCGCGACGAAGGACTGCACACGGACTTTGCGTGCCT------CTAC 52556 |||||| |||| || || || || || || ||||| ||||| || || || || | Sbjct 141286 AACGAGCTGATCTCTCGTGATGAGGGTCTCCACACTGACTTCGCTTGTCTGCTGTTCTCC 141345 Query 52557 TACAAGA-----CGCGCGTGACCGAAAAATTGGATTCGGACACGATCCTGAGCATGTTCA 52611 ||| || ||| | |||| || || | || || || | ||| || Sbjct 141346 CACATGAACCACCGCCCC-GACCCCAAGATGG--TT-------GAGGCT-ATCATTGTC- 141393 Query 52612 AGGAGGCGGTGGCTATCGAAAAGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGG 52671 ||||| || | ||||| ||||||| | || | ||| || || | ||||| | Sbjct 141394 --GAGGCCGTCGGCATCGAGCAGGAGTTCCTGACTGACGCTCTTCCCTGTGGTCTGCTTG 141451 Query 52672 GCATGAACGCGCAGTCCATGTGCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTGC 52731 |||||||| | || |||||||||||||||||||| || || || || ||| ||||| Sbjct 141452 GCATGAACTCCAAGCTGATGTGCGAGTACATCGAGTTCGTCGCTGACCGCCTGCTGGTGG 141511 Query 52732 AGCTCGGGCAGCCA-AAGTACTTCAACGCTCGCAATCCGTTTGAGTTTATGAACAACATT 52790 ||| |||| | | ||||||| ||||||| ||| || || || || ||| | ||| Sbjct 141512 CCCTC-GGCAACAAGAAGTACTACAACGCTACCAACCCCTTCGACTTCATGGAGTCCATC 141570 Query 52791 TCGCTTGAGGGCAAGACCAACTTTTTCGAGAAGCGAGTCGGCGAGTA 52837 || || | |||||||||||||| ||||||||||| ||||| || || Sbjct 141571 TCCCTGGCTGGCAAGACCAACTTCTTCGAGAAGCGTGTCGGTGACTA 141617 >seq601 Length=120753 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 ||| || || | |||||| || | || | | |||||||| || ||||||||||| Sbjct 55590 GCCACCACGAAGACGCAACACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCCGA 55649 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 | |||||| |||||| || || ||||| | |||| || ||||| ||||| ||||| Sbjct 55650 AAGAGTACGTCCGTCCTCCAGCTGCTTACCAGCGAAGATAAGGCGCTGCTGGTCAGGAGG 55709 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566 ||||| || ||||| ||| || || | | || | ||||||| ||||| || Sbjct 55710 AATACCCTCCTTGTCCTGGATCTTGCTCTTGACATTATCGATAGTGTCGGATGACTCGAC 55769 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | || || ||||| || || || || ||||||||||| Sbjct 55770 TTCAAGTGTAATAGTCTTGCCAGTGAGCGTCTTCACGAAAATCTGCAT 55817 Score = 87.8 bits (96), Expect = 2e-12 Identities = 138/195 (71%), Gaps = 2/195 (1%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 ||||||||||||||||||||||| | |||||| ||| || || || || || | Sbjct 55852 GACTCCTTTTGAATGTTGTAGTCCGAAAGAGTACGTCCGTCTTCAAGCTGCTTGCCTGCG 55911 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTG-TTTTAA 138539 |||| |||||||| ||||| || || || || || || || ||| | || | || | Sbjct 55912 AAGATGAGACGCTGCTGGTCGGGGGGAATGCCCTCCTTATC-TTGAATCTTGGACTTCAC 55970 Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599 | || | |||||||| ||||| || || | || | || || ||||| || || || Sbjct 55971 ATTATCGATGGTGTCGGATGACTCGACTTCAAGTGTAATAGTCTTGCCAGTGAGCGTCTT 56030 Query 138600 TACAAAAATCTGCAT 138614 || ||||||||||| Sbjct 56031 CACGAAAATCTGCAT 56045 >seq183 Length=38727 Score = 96.9 bits (106), Expect = 3e-15 Identities = 134/184 (73%), Gaps = 4/184 (2%) Strand=Plus/Plus Query 138425 CCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGA 138484 |||| || |||||||||||||||| || || |||||||| || || |||| ||| Sbjct 24773 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGA 24832 Query 138485 TTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTG 138542 | |||||||| ||||| || || || || || ||||| || | || || || | ||| Sbjct 24833 TCAGACGCTGCTGGTCGGGGGGGATGCCCTCCTTGTC-CTGGATCTTGGTCTTGACGTTG 24891 Query 138543 TTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTAC 138602 || | ||||||| ||||||| || |||| || | || ||||| ||||| || || || Sbjct 24892 -TCGATGGTGTCGCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGAC 24950 Query 138603 AAAA 138606 ||| Sbjct 24951 GAAA 24954 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496256221533120