Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20nordicum_20[genbank_20GCA_5F001278595.1_202015-09-03] 996 sequences; 30,844,022 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq183 113 4e-20 seq601 104 2e-17 >seq183 Length=38727 Score = 113 bits (124), Expect = 4e-20 Identities = 135/181 (75%), Gaps = 2/181 (1%) Strand=Plus/Plus Query 126926 TTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATC 126985 || || || ||||| |||| || ||||| ||| || ||||| ||||| ||| ||||| Sbjct 24775 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGATC 24834 Query 126986 AATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTC 127044 | |||||||| ||||| || ||||||||||||||| ||| || ||||| |||| || Sbjct 24835 AGACGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGTCTTGACGTTG-TC 24893 Query 127045 GACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAA 127104 || |||||| | |||||| |||| ||| | || || || ||||| || || || || Sbjct 24894 GATGGTGTCGCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 24953 Query 127105 A 127105 | Sbjct 24954 A 24954 >seq601 Length=120753 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | |||||||||| || | || ||||| || || || ||||| || Sbjct 55591 CCACCACGAAGACGCAACACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCCGAA 55650 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || || || || ||||| || |||||| |||| | |||||||| || ||||| Sbjct 55651 AGAGTACGTCCGTCCTCCAGCTGCTTACCAGCGAAGATAAGGCGCTGCTGGTCAGGAGGA 55710 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 || |||||||||||| ||| || ||||| | |||| ||||| | ||||||| Sbjct 55711 ATACCCTCCTTGTCCTGGATCTTGCTCTTGACATTATCGATAGTGTCGGATGACTCGACT 55770 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | || | || ||||| || || || || || ||||||||||| Sbjct 55771 TCAAGTGTAATAGTCTTGCCAGTGAGCGTCTTCACGAAAATCTGCAT 55817 Score = 86.0 bits (94), Expect = 6e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| |||||||| ||||| || | || || || || ||||| || || Sbjct 55849 GTGGACTCCTTTTGAATGTTGTAGTCCGAAAGAGTACGTCCGTCTTCAAGCTGCTTGCCT 55908 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| |||| | |||||||| ||||| || ||||||||||| || || || ||| Sbjct 55909 GCGAAGATGAGACGCTGCTGGTCGGGGGGAATGCCCTCCTTATCTTGAATCTTGGACTTC 55968 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096 | | |||| |||||| | ||||||||| | || | || ||||| || || || Sbjct 55969 ACATTATCGATGGTGTCGGATGACTCGACTTCAAGTGTAATAGTCTTGCCAGTGAGCGTC 56028 Query 127097 TTTACAAAAATCTGCAT 127113 || || ||||||||||| Sbjct 56029 TTCACGAAAATCTGCAT 56045 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475494880015040