Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20nordicum_20[genbank_20GCA_5F001278595.1_202015-09-03] 996 sequences; 30,844,022 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq183 136 4e-27 seq601 127 2e-24 seq243 102 9e-17 >seq183 Length=38727 Score = 136 bits (150), Expect = 4e-27 Identities = 141/182 (77%), Gaps = 2/182 (1%) Strand=Plus/Plus Query 46404 CCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 46463 |||| ||||| ||||||||| || ||||| | || ||||||||||| |||||||| | Sbjct 24773 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGA 24832 Query 46464 TCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG 46523 ||| ||||||||||||| || | || |||||||||| |||||| |||||| ||| | Sbjct 24833 TCAGACGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGTCTTGA-CGTTG 24891 Query 46524 -CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACA 46582 | | ||||||||||| || ||||| | || ||||| || |||||||| || || || Sbjct 24892 TCGATGGTGTCGCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACG 24951 Query 46583 AA 46584 || Sbjct 24952 AA 24953 >seq601 Length=120753 Score = 127 bits (140), Expect = 2e-24 Identities = 171/238 (72%), Gaps = 0/238 (0%) Strand=Plus/Plus Query 46356 TATATTATTTGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATAT 46415 || |||| | ||| || | | |||||||||||| || | || |||||| ||||| | Sbjct 55580 TAAATTACTGGCCACCACGAAGACGCAACACCAGGTGGAGAGTGGACTCCTTCTGGATGT 55639 Query 46416 TGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCT 46475 ||||||| || ||||| || |||| || |||||||| || ||||| || | |||||||| Sbjct 55640 TGTAGTCCGAAAGAGTACGTCCGTCCTCCAGCTGCTTACCAGCGAAGATAAGGCGCTGCT 55699 Query 46476 GGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGC 46535 |||| | || | | |||||||||| |||||| |||||| | | | |||||| Sbjct 55700 GGTCAGGAGGAATACCCTCCTTGTCCTGGATCTTGCTCTTGACATTATCGATAGTGTCGG 55759 Query 46536 TCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || || || || | || || || ||||| || ||||| || || || || ||||| Sbjct 55760 ATGACTCGACTTCAAGTGTAATAGTCTTGCCAGTGAGCGTCTTCACGAAAATCTGCAT 55817 Score = 122 bits (134), Expect = 1e-22 Identities = 135/180 (75%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 ||||||||| || |||||||| || ||||| || |||| || ||||||||||| ||||| Sbjct 56082 CTCCTTTTGAATGTTGTAGTCCGAAAGAGTACGTCCGTCCTCAAGCTGCTTGCCTGCGAA 56141 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | ||||||||||||| || | || |||||| ||| ||||||| ||| | | Sbjct 56142 GATGAGACGCTGCTGGTCGGGGGGGATGCCCTCCTTATCCTGGATCTTCGACTTAACATT 56201 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | || ||||| || || || || | ||||||||||| || ||||| || ||||| Sbjct 56202 GTCGATAGTATCGCTGGACTCAACCTCAAGAGTGATGGTTTTCCCGGTCAGGGTCTTAAC 56261 Score = 114 bits (126), Expect = 1e-20 Identities = 139/187 (74%), Gaps = 2/187 (1%) Strand=Plus/Plus Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443 ||| || || | ||| |||||| ||||| |||||||| || ||||| || |||| || Sbjct 56350 CACGAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTACGTCCGTCCTC 56409 Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 46503 ||||||||||| ||||| || | ||||||||||||| || | || |||||| ||| Sbjct 56410 AAGCTGCTTGCCTGCGAAGATGAGACGCTGCTGGTCGGGGGGGATGCCCTCCTTATCCTG 56469 Query 46504 GATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTT 46562 ||||||| ||| | ||| | | | || ||||| || || || || | |||||||| | Sbjct 56470 GATCTTCGACTT-AACGTTGTCGATAGTATCGCTGGACTCGACCTCAAGGGTGATGGTCT 56528 Query 46563 TGCCCGT 46569 |||| || Sbjct 56529 TGCCAGT 56535 Score = 98.7 bits (108), Expect = 1e-15 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 ||||||||| || |||||||| || ||||| || |||| || ||||||||||| ||||| Sbjct 55854 CTCCTTTTGAATGTTGTAGTCCGAAAGAGTACGTCCGTCTTCAAGCTGCTTGCCTGCGAA 55913 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | ||||||||||||| || | || |||||| || ||||| ||| | | Sbjct 55914 GATGAGACGCTGCTGGTCGGGGGGAATGCCCTCCTTATCTTGAATCTTGGACTTCACATT 55973 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | |||||| || || || || | || || || ||||| || ||||| || || Sbjct 55974 ATCGATGGTGTCGGATGACTCGACTTCAAGTGTAATAGTCTTGCCAGTGAGCGTCTTCAC 56033 Query 46582 AAAGATTTGCAT 46593 || || ||||| Sbjct 56034 GAAAATCTGCAT 56045 >seq243 Length=29033 Score = 102 bits (112), Expect = 9e-17 Identities = 82/99 (83%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| ||||| || || |||||||| |||| |||||||||||||||||||| Sbjct 22809 CTCCTTCTGGATGTTGTAATCCGAAAGAGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAA 22750 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTC 46500 |||| |||||||||||| | || | | ||||||||| Sbjct 22749 GATCAGGCGCTGCTGGTCAGGGGGAATACCCTCCTTGTC 22711 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565231362781920