Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20nordicum_20[genbank_20GCA_5F001278595.1_202015-09-03] 996 sequences; 30,844,022 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq601 152 1e-31 seq183 104 5e-17 seq243 98.7 2e-15 seq46 91.5 3e-13 >seq601 Length=120753 Score = 152 bits (168), Expect = 1e-31 Identities = 159/209 (76%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||| || |||||||| |||||||| ||||| || | |||||| | || ||||| Sbjct 55837 ACGAGGTGGAGGGTGGACTCCTTTTGAATGTTGTAGTCCGAAAGAGTACGTCCGTCTTCA 55896 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| ||||||||||| || || || ||||| || |||||||| || || |||||| Sbjct 55897 AGCTGCTTGCCTGCGAAGATGAGACGCTGCTGGTCGGGGGGAATGCCCTCCTTATCTTGA 55956 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||| || || || |||||||| || || |||||||| |||| ||||| Sbjct 55957 ATCTTGGACTTCACATTATCGATGGTGTCGGATGACTCGACTTCAAGTGTAATAGTCTTG 56016 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | || || ||||| | ||||| Sbjct 56017 CCAGTGAGCGTCTTCACGAAAATCTGCAT 56045 Score = 145 bits (160), Expect = 2e-29 Identities = 160/213 (75%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 194928 CAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATC 194987 ||| || ||||| ||||||||||| || || || ||||| || | |||||| | || || Sbjct 55605 CAACACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTACGTCCGTC 55664 Query 194988 TTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTC 195047 || ||||||||||| ||||||||||| || || ||||| |||||||| || || ||||| Sbjct 55665 CTCCAGCTGCTTACCAGCGAAGATAAGGCGCTGCTGGTCAGGAGGAATACCCTCCTTGTC 55724 Query 195048 TTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGT 195107 || || || |||||| || || || ||||| || || |||||||| |||| || Sbjct 55725 CTGGATCTTGCTCTTGACATTATCGATAGTGTCGGATGACTCGACTTCAAGTGTAATAGT 55784 Query 195108 CTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||| || || | || || ||||| | ||||| Sbjct 55785 CTTGCCAGTGAGCGTCTTCACGAAAATCTGCAT 55817 Score = 105 bits (116), Expect = 1e-17 Identities = 145/201 (72%), Gaps = 4/201 (2%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||| || |||||||| |||||||| ||||| || | |||||| | || || || Sbjct 56065 ACGAGGTGGAGGGTGGACTCCTTTTGAATGTTGTAGTCCGAAAGAGTACGTCCGTCCTCA 56124 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| ||||||||||| || || || ||||| || || ||||| || || || || Sbjct 56125 AGCTGCTTGCCTGCGAAGATGAGACGCTGCTGGTCGGGGGGGATGCCCTCCTTATCCTGG 56184 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGT--CCGAACTTTCCACTTCAAGGGTAACCGTCT 195109 || || ||| || || || || || | | | || || || ||||| || | || | Sbjct 56185 ATCTTCGACTTAACATTGTCGATAGTATCGCTGGAC--TCAACCTCAAGAGTGATGGTTT 56242 Query 195110 TTCCTGTCAAAGTTTTTACGA 195130 | || |||| || || |||| Sbjct 56243 TCCCGGTCAGGGTCTTAACGA 56263 Score = 102 bits (112), Expect = 2e-16 Identities = 136/187 (73%), Gaps = 4/187 (2%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||| ||||| ||||| || || || ||||| || | |||||| | || || || Sbjct 56351 ACGAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTACGTCCGTCCTCA 56410 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| ||||||||||| || || || ||||| || || ||||| || || || || Sbjct 56411 AGCTGCTTGCCTGCGAAGATGAGACGCTGCTGGTCGGGGGGGATGCCCTCCTTATCCTGG 56470 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGT--CCGAACTTTCCACTTCAAGGGTAACCGTCT 195109 || || ||| ||||| || || || | | | || || || |||||||| | |||| Sbjct 56471 ATCTTCGACTTAACGTTGTCGATAGTATCGCTGGAC--TCGACCTCAAGGGTGATGGTCT 56528 Query 195110 TTCCTGT 195116 | || || Sbjct 56529 TGCCAGT 56535 >seq183 Length=38727 Score = 104 bits (114), Expect = 5e-17 Identities = 133/182 (73%), Gaps = 6/182 (3%) Strand=Plus/Plus Query 194953 TTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATA 195012 || || || ||||| ||| || || | ||||| ||||||||||| || |||||||| Sbjct 24775 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGATC 24834 Query 195013 AGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCA 195072 || || || ||||| || || ||||| || ||||| || || || ||||||||| || Sbjct 24835 AGACGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGTCG 24894 Query 195073 ATGGTGTC---CGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACG 195129 |||||||| ||| || || || ||||||| ||||| || |||| || || ||| Sbjct 24895 ATGGTGTCGCTCGA---CTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACG 24951 Query 195130 AA 195131 || Sbjct 24952 AA 24953 >seq243 Length=29033 Score = 98.7 bits (108), Expect = 2e-15 Identities = 92/117 (79%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || |||||||| || ||||| || || || |||||||| | |||||| | || || ||| Sbjct 22826 ACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAATCCGAAAGAGTGCGGCCGTCCTCG 22767 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCT 195048 |||||||| || |||||||| || || || ||||| || ||||| || || |||||| Sbjct 22766 AGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCAGGGGGAATACCCTCCTTGTCT 22710 >seq46 Length=203589 Score = 91.5 bits (100), Expect = 3e-13 Identities = 184/273 (67%), Gaps = 0/273 (0%) Strand=Plus/Plus Query 160589 TTCTACGCCATCTGGACTTCCGATCTTTTCATGAAGAGAGTGAAAGACAATGGGGATTGG 160648 |||||||| | ||||| ||||||| ||||||||| | || | | ||| || || ||| Sbjct 124325 TTCTACGCTTTGTGGACCCCCGATCTCTTCATGAAGCGTGTTGAGGCCAACGGTGACTGG 124384 Query 160649 AGCCTTTTCTGTCCCAATGAAGCGCCTGGACTTGATGATGTTTATGGTTCCGAGTTCGAG 160708 | ||| ||||| ||||| || || || || || | |||||| || || |||||||| Sbjct 124385 ACCCTCTTCTGCCCCAACGAGGCCCCCGGTCTGGCTGATGTCTACGGCGATGAGTTCGAT 124444 Query 160709 ACTCTTTATGAAAGATACGAAAAAGAGGGAAGAGCCAAAAAGGTCGTGAAGGCCCAAGAA 160768 |||| || | | ||||| | || || | | | ||| | | ||||| || | Sbjct 124445 GCTCTCTACGCGAAGTACGAGCAGGAAGGCCGTGGCCGCAAGACCATCAAGGCTCAGAAG 124504 Query 160769 CTGTGGCATCACATCCTTGTCGCCCAAGTCGAGGTGGGTATGCCCTTTATCGCATACAAG 160828 || ||| | ||| |||| ||||| ||| |||| || ||||| |||||| Sbjct 124505 CTCTGGTACGCCATTCTTGAGGCCCAGACTGAGACTGGTAACCCATTTATGCTCTACAAG 124564 Query 160829 GATGCCATCTGTCGCAAGAGTAACCAGAAGAAC 160861 ||||| | |||||||||||||||||| Sbjct 124565 GATGCTTGCAACAAGAAGAGTAACCAGAAGAAC 124597 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109467441627932