Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20nordicum_20[genbank_20GCA_5F001278595.1_202015-09-03] 996 sequences; 30,844,022 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq601 95.1 8e-15 seq183 84.2 1e-11 >seq601 Length=120753 Score = 95.1 bits (104), Expect = 8e-15 Identities = 153/218 (70%), Gaps = 8/218 (4%) Strand=Plus/Plus Query 34769 CAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATC 34828 ||| |||| ||| | ||| || ||||| ||||| ||||||||||| | ||| | || Sbjct 55605 CAACACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTACGTCCGTC 55664 Query 34829 ATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34888 |||||||| || || || || || || || |||||||| | || | ||||||||||| Sbjct 55665 CTCCAGCTGCTTACCAGCGAAGATAAGGCGCTGCTGGTCAGGAGGAATACCCTCCTTGTC 55724 Query 34889 GCTAATCTTCTGTTTGACGGATGCTATCGAT----TCACCGGCCTCAACATCGACGGTTA 34944 ||||| ||||| || ||||||| || | ||| || || | || | Sbjct 55725 CTGGATCTTGCTCTTGAC--AT--TATCGATAGTGTCGGATGACTCGACTTCAAGTGTAA 55780 Query 34945 TGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 | || || || ||||| |||||||| || ||||||||| Sbjct 55781 TAGTCTTGCCAGTGAGCGTCTTCACGAAAATCTGCATA 55818 Score = 82.4 bits (90), Expect = 5e-11 Identities = 137/196 (70%), Gaps = 8/196 (4%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || || |||||||| ||||||||||| | ||| | || || ||||| || || || || Sbjct 55855 TCCTTTTGAATGTTGTAGTCCGAAAGAGTACGTCCGTCTTCAAGCTGCTTGCCTGCGAAG 55914 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || |||||||| | || | |||||||| || |||||| || || || Sbjct 55915 ATGAGACGCTGCTGGTCGGGGGGAATGCCCTCCTTATCTTGAATCTTGGACTTCAC--AT 55972 Query 34911 GCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTT 34966 ||||||| || | ||| || || | || || || || || ||||| ||||| Sbjct 55973 --TATCGATGGTGTCGGATGACTCGACTTCAAGTGTAATAGTCTTGCCAGTGAGCGTCTT 56030 Query 34967 CACAAAGATCTGCATA 34982 ||| || ||||||||| Sbjct 56031 CACGAAAATCTGCATA 56046 >seq183 Length=38727 Score = 84.2 bits (92), Expect = 1e-11 Identities = 126/179 (70%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 34794 TTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATT 34853 ||||| ||||| ||||| ||| | || |||| || ||||| |||||||| || || Sbjct 24775 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGATC 24834 Query 34854 AGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCT 34913 || || |||||||| | || | ||||||||||| ||||| |||||| | Sbjct 24835 AGACGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGTCG 24894 Query 34914 ATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAA 34972 || | || | | ||| ||||||| ||| ||||| || ||||| || ||||| || || Sbjct 24895 ATGGTGTCGCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 24953 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324629659353888