Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20nordicum_20[genbank_20GCA_5F001278595.1_202015-09-03] 996 sequences; 30,844,022 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq601 98.7 6e-15 >seq601 Length=120753 Score = 98.7 bits (108), Expect = 6e-15 Identities = 115/153 (75%), Gaps = 2/153 (1%) Strand=Plus/Plus Query 480618 TCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTG 480677 || || || ||||| ||||| || ||||| || || || ||||||||||| || |||||| Sbjct 55663 TCCTCCAGCTGCTTACCAGCGAAGATAAGGCGCTGCTGGTCAGGAGGAATACCCTCCTTG 55722 Query 480678 TCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAAGGGTAAT 480736 || || ||||| |||||| || ||||| || | || | | |||||| ||||| Sbjct 55723 TCCTGGATCTTGCTCTTGACATTATCGATAGTGTCGGATGACTCGA-CTTCAAGTGTAAT 55781 Query 480737 AGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 ||| || || ||||| ||||| |||||||| || Sbjct 55782 AGTCTTGCCAGTGAGCGTCTTCACGAAAATCTG 55814 Score = 89.7 bits (98), Expect = 3e-12 Identities = 113/153 (74%), Gaps = 2/153 (1%) Strand=Plus/Plus Query 480618 TCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTG 480677 |||||||| ||||| || || || || ||||| || || || || ||||| || ||||| Sbjct 55891 TCTTCAAGCTGCTTGCCTGCGAAGATGAGACGCTGCTGGTCGGGGGGAATGCCCTCCTTA 55950 Query 480678 TCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAAGGGTAAT 480736 ||||||||||| || ||| || || || || | || | | |||||| ||||| Sbjct 55951 TCTTGAATCTTGGACTTCACATTATCGATGGTGTCGGATGACTCGA-CTTCAAGTGTAAT 56009 Query 480737 AGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 ||| || || ||||| ||||| |||||||| || Sbjct 56010 AGTCTTGCCAGTGAGCGTCTTCACGAAAATCTG 56042 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3268136476727408