Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20nordicum_20[genbank_20GCA_5F001278595.1_202015-09-03]
996 sequences; 30,844,022 total letters
Query= NC_021858.1
Length=1908524
Score E
Sequences producing significant alignments: (Bits) Value
seq79 143 3e-28
seq46 114 2e-19
seq25 105 8e-17
seq39 104 3e-16
seq57 98.7 1e-14
seq778 96.9 4e-14
>seq79
Length=198956
Score = 143 bits (158), Expect = 3e-28
Identities = 179/243 (74%), Gaps = 2/243 (1%)
Strand=Plus/Minus
Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750
||||| ||| || || || ||| |||||| |||||||||||||| | || |||||
Sbjct 141626 GCCTTCTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCAGCCAGGGAGATG 141567
Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCG 868810
||||||| | ||| ||||||| | ||||||| ||| | | ||||| | | |
Sbjct 141566 GACTCCATGAAGTCGAAGGGGTTGGTAGCGTTGTAGTACTTCTTGTTGCCGAGGGCCACC 141507
Query 868811 AGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATG 868870
||||||||||| ||||| ||||||||||||| |||||| || || ||||||||| |
Sbjct 141506 AGCAGGCGGTCAGCGACGAACTCGATGTACTCGCACATCAGCTTGGAGTTCATGCCAAGC 141447
Query 868871 AGCGCCAC-CGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGAT 868929
|| |||| || || | || ||| ||||| | |||||| ||||||||||||| ||
Sbjct 141446 AG-ACCACAGGGAAGAGCGTCAGTCAGGAACTCCTGCTCGATGCCGACGGCCTCGACAAT 141388
Query 868930 GAT 868932
|||
Sbjct 141387 GAT 141385
Score = 118 bits (130), Expect = 1e-20
Identities = 178/251 (71%), Gaps = 3/251 (1%)
Strand=Plus/Minus
Query 869633 GAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTTGG 869692
|||||||||||||| || ||||||||||||||| ||| | |||| | | |||
Sbjct 140972 GAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCAACGGGCCTCGGGGATCTGG 140913
Query 869693 ACCTCCTTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGAAA 869752
||||| |||| || || | ||||||||| || ||||| ||| |||||||||
Sbjct 140912 ACCTCGGAACTGAAACGTTCGACAAGGTTCTCGTTGACAATGCCATCGGAGGCGGCGAAG 140853
Query 869753 AAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCTGA-GCG--ACACCCAGTGG 869809
|||||||||||||| ||| |||| ||||| |||||| | | ||| ||||| |
Sbjct 140852 AAAGCCAGGACGTGGGAGATGAAGTAACGCTCATCGTCGTTCAGGCGGTTGTGCCAGTCG 140793
Query 869810 ACGGTGTCGGCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTTTG 869869
|| | ||| || | ||| ||||| ||||||| ||||| |||||||| |||
Sbjct 140792 TGAAGATCCTTGGAGAGATCAATCTCTTCGGCAGTCCAGAAAGAGGCTTCGGCCTTCTTG 140733
Query 869870 TACATCTCCCA 869880
||||| | |||
Sbjct 140732 TACATTTGCCA 140722
Score = 107 bits (118), Expect = 2e-17
Identities = 141/195 (72%), Gaps = 9/195 (5%)
Strand=Plus/Minus
Query 869179 ACCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTT 869238
||| || || ||| ||||| |||||| || | ||| || ||||| ||||| |||||
Sbjct 141312 ACCCTCATCACGAGAGATCAGCTCGTTGGAGAAAGTGAGACCAGGCATCAGGCCACGCTT 141253
Query 869239 CTTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 869298
||||||||| ||||||| | ||| ||| ||||| ||||| |||||||| ||||| ||
Sbjct 141252 CTTGAGCCAGAAGATGGAGGCGAATGAGCCAGAGAAGAAGATACCCTCGACAGCGGCGAA 141193
Query 869299 GCCGATGAGCCGCTCGGCAAAGGT---GTCGAGGCCCTCCTTGTTGATCCACTTCATCGC 869355
| | | || ||| || ||||| ||| || | |||||||||||| | ||
Sbjct 141192 GGCAACCAGACGCGAAGCGAAGGTTGACTCGCGG------TCGTTGATCCACTTGAGGGC 141139
Query 869356 CCAGTCGGCCTTTTT 869370
||||| |||||| ||
Sbjct 141138 CCAGTTGGCCTTCTT 141124
>seq46
Length=203589
Score = 114 bits (126), Expect = 2e-19
Identities = 158/221 (71%), Gaps = 0/221 (0%)
Strand=Plus/Minus
Query 1628372 CGCCGTAGCACTCGTGCAGGCCGGGCGCCTCGGACGGACAAAAGAGCGACCAGTCGCCAC 1628431
|||||||| || ||| ||||| |||||| || || ||||| | |||||| ||
Sbjct 124433 CGCCGTAGACATCAGCCAGACCGGGGGCCTCGTTGGGGCAGAAGAGGGTCCAGTCACCGT 124374
Query 1628432 CGGTCACCGCGCGGCGCATAAAGAGGTCACACGTCCACAGTGCGTAAAAGAGGTCGCGCG 1628491
|| | | | || ||| ||||| || ||||||| ||||| |||||||| || |
Sbjct 124373 TGGCCTCAACACGCTTCATGAAGAGATCGGGGGTCCACAAAGCGTAGAAGAGGTCACGAG 124314
Query 1628492 CCCGGTTCTCCTCCTTGCCGTGGTTCTTTTTGAGGTCGAGCCAGTCGACAATGTCGGCGT 1628551
| || |||||| || ||||||||||| || ||||| | |||| | |||||||
Sbjct 124313 CGCGAACCTCCTCTTTACCGTGGTTCTTCCGCAGATCGAGGAACTCGAAGACATCGGCGT 124254
Query 1628552 GCCACGGCTCCAGGTAGCAGGCAAAGGCGCCCTTGCGCTTG 1628592
||||||||||||||||| |||||| || || |||||||
Sbjct 124253 GCCACGGCTCCAGGTAGATGGCAAATGCACCAGGGCGCTTG 124213
>seq25
Length=84214
Score = 105 bits (116), Expect = 8e-17
Identities = 90/111 (81%), Gaps = 0/111 (0%)
Strand=Plus/Minus
Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245
|| ||||||||| | || || ||| | || ||||| | || |||||| | || || |||
Sbjct 71120 GCTGCCAACTACTTGGATATTAAGGCCCTCCTCGACGTCGGCTGCAAGACAGTCGCTAAC 71061
Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAAG 1592296
||||||||||||||||| || ||||||||||| |||||||| |||||| ||
Sbjct 71060 ATGATCAAGGGCAAGTCCCCGGAGGAGATCCGTAAGACCTTCAACATCCAG 71010
>seq39
Length=76698
Score = 104 bits (114), Expect = 3e-16
Identities = 118/157 (75%), Gaps = 1/157 (1%)
Strand=Plus/Minus
Query 19047 GACAGCATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGCGAG 19106
||||||||||| || || || || || ||| |||||||| || | || || ||||||
Sbjct 76535 GACAGCATCGGTGGAACCGTAACATGTGTGATCCGCAACGTACCAGTTGGACTTGGCGAG 76476
Query 19107 CCGTGCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCCACC 19166
|| ||||| || ||| | || || ||||| |||||||||||| ||||| || |||
Sbjct 76475 CCCTGCTTCGATAAGCTTGAAGCTAAGCTCGGCCACGCCATGCTCAGTATCCCCGCAACC 76416
Query 19167 AAGGGATTCGAGATTGGCAGCGGGTT-TGCGGGTGCG 19202
||||| |||||| ||||| ||| || |||| ||||
Sbjct 76415 AAGGGCTTCGAGGTTGGCTCCGGTTTCGGCGGCTGCG 76379
>seq57
Length=203323
Score = 98.7 bits (108), Expect = 1e-14
Identities = 249/370 (67%), Gaps = 19/370 (5%)
Strand=Plus/Plus
Query 1726685 TGCGGCTGGGCGGCGGCGCGCACGGCGTCGAGTGCCGTCGCCACGCTCCCGTCGGTGCCG 1726744
|| || || | |||||| | | |||||||| || | || | | ||||||||||||
Sbjct 19846 TGGGGGTGCGAGGCGGCACCGATGGCGTCGACAGCGACGGTCAGGTTACCGTCGGTGCCG 19905
Query 1726745 TTCTTGAAGCCGATGGCCAGCGGCAGTGCCGACGCCATCTCGCGGTGCACCTGGCTCTCG 1726804
|||||| ||||||||| | | ||| | || || | ||||||||| | ||| ||||
Sbjct 19906 TTCTTGTAGCCGATGGGGAAGGACAGGCCTGAGGCGAGCTCGCGGTGAAGCTGAGACTCG 19965
Query 1726805 GTCGTGCGCGCGCCCACGGCGCCCCACGCCACCAGGTCTGCCA---AATAAGGGGCCACC 1726861
|| ||||| ||||| | |||||| | | ||||||||||| | | |||||
Sbjct 19966 GTAGTGCGAGCGCCGATCGCGCCCAGAGAGATCAGGTCTGCCAGGTACTGAGGGG----- 20020
Query 1726862 AGA-GGACT-GAGAAACTCGACGGCCACGGGCTGATCGACGGCGACGACGAGATCGCGCA 1726919
||| || | ||| | |||| ||| | ||| | || ||| | | || |||
Sbjct 20021 AGATGGTGTCGAGCATCTCGGAGGCGATGGGGAG-TC--CGGTGCTGGTCAGGTCGGTGT 20077
Query 1726920 ACAG---GCGGCGCGACGCCGTCAGGCCGTCGGCCAGGCGGCACGACCCGTCGAGGTCGG 1726976
|||| ||| | ||||| ||| || | | | | | | | | |||||| ||||
Sbjct 20078 ACAGCTTACGG-GAGACGC--GCAGACCCTTGTTGATGTTGAAGGTCTCGTCGATATCGG 20134
Query 1726977 GGTCGCTGGCCAGGCCCTTCCACCCGACGGTCGTGCGCGGCTTTTCGACATAGGCGCGCA 1727036
| ||| || ||| |||||||| ||||| || ||||| ||||| || | ||||| ||||
Sbjct 20135 GATCGTTGATCAGTCCCTTCCAGCCGACCGTTGTGCGGGGCTTCTCCAGGTAGGCACGCA 20194
Query 1727037 TGACCACGCA 1727046
||| ||||||
Sbjct 20195 TGATCACGCA 20204
>seq778
Length=218026
Score = 96.9 bits (106), Expect = 4e-14
Identities = 214/319 (67%), Gaps = 8/319 (3%)
Strand=Plus/Minus
Query 18099 TGGCGAGTCGCACGGGGCGGGCGTCGGCTGCATCATCGACGGCGTGCCGCCGTGCATGCC 18158
||||||||| ||| | ||||||||| ||| |||| || || || || |
Sbjct 575 TGGCGAGTCCCACTGTCGCTCCGTCGGCTGTATCGTCGATGGATGTCCTCCAGGCCTAGA 516
Query 18159 ACTGGCCGAGGCCGACATCCAGCCTCAGTTGGATCGGCGCCGACCGGGCCAGGGCGCACT 18218
| | |||||||||||||||||||||| || |||||||| || ||||| |||| ||
Sbjct 515 AATCACCGAGGCCGACATCCAGCCTCAAATGACCCGGCGCCGTCCCGGCCAAAGCGCCCT 456
Query 18219 TTCCACGCCGCGCAACGAGCCCGATCGCGTCATCATCCAGTCGGGCACGGAGAACGGCCT 18278
| | || ||||| ||||| || || ||| |||||||| ||||| ||| |||| |
Sbjct 455 TACTACCCCGCGAGACGAGAAGGACCGAGTCGAGATCCAGTCAGGCACAGAGTTCGGCAT 396
Query 18279 CACGCTCGGCTCGCCCGTCGGCCTCTTTGTGGCCAACCGCGACCAGCGGCCCGTCGACTA 18338
||| || ||| | || | | | | | || ||| |||||||| || |||||
Sbjct 395 CACTCTGGGCACACCAATTGCCATGGTCGTCCGCAATGAGGACCAGCGTCCTAAGGACTA 336
Query 18339 TTCCGACATGTGCAA------GGTGCCGCGGCCCT-CACACGCCGACTACACCTACATGG 18391
| ||| | ||| || || | ||||| || ||||||| ||||||| | |
Sbjct 335 CGGCAACA-GCACAATGGACCTGTACCCCCGCCCTAGCCATGCCGACTTCACCTACCTTG 277
Query 18392 CCAAGTACGGCATCAAGGC 18410
|||||||| |||||||
Sbjct 276 AGAAGTACGGTGTCAAGGC 258
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 6107057463575732
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |