Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20nordicum_20[genbank_20GCA_5F001278595.1_202015-09-03]
996 sequences; 30,844,022 total letters
Query= NC_025412.1
Length=369360
Score E
Sequences producing significant alignments: (Bits) Value
seq601 96.9 8e-15
seq46 86.0 1e-11
>seq601
Length=120753
Score = 96.9 bits (106), Expect = 8e-15
Identities = 145/206 (70%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
|| |||||||| || || || || || | ||||| || || ||||| ||||
Sbjct 55802 AAGACGCTCACTGGCAAGACTATTACACTTGAAGTCGAGTCATCCGACACTATCGATAAT 55743
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304
|| ||| ||||| || || || || || ||| || ||| || | |||||||||
Sbjct 55742 GTCAAGAGCAAGATCCAGGACAAGGAGGGTATTCCTCCTGACCAGCAGCGCCTTATCTTC 55683
Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364
|| || |||||| |||| || ||| | ||| | | || |||||| ||||||| |||||
Sbjct 55682 GCTGGTAAGCAGCTGGAGGACGGACGTACTCTTTCGGACTACAACATCCAGAAGGAGTCC 55623
Query 206365 ACTCTTCACCTTGTTTTGAGACTTCG 206390
||||| ||||| || ||| | |||||
Sbjct 55622 ACTCTCCACCTGGTGTTGCGTCTTCG 55597
Score = 84.2 bits (92), Expect = 5e-11
Identities = 81/104 (78%), Gaps = 0/104 (0%)
Strand=Plus/Plus
Query 204752 CGAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTC 204811
||||| | ||| || ||||| ||||| ||||| ||||||| || ||||| | | |||
Sbjct 55597 CGAAGACGCAACACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTA 55656
Query 204812 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTG 204855
| ||| || ||||||||||| || ||||||||||| || || ||
Sbjct 55657 CGTCCGTCCTCCAGCTGCTTACCAGCGAAGATAAGGCGCTGCTG 55700
>seq46
Length=203589
Score = 86.0 bits (94), Expect = 1e-11
Identities = 166/245 (68%), Gaps = 0/245 (0%)
Strand=Plus/Minus
Query 173107 GCGTCCTTGTAGACGATGAAGGGCATACCAACCTCCGCTTGAGCCACCAAAATGTGGTGC 173166
|| |||||||||| || || || ||||| ||| | || ||| | | |||| || |
Sbjct 124569 GCATCCTTGTAGAGCATAAATGGGTTACCAGTCTCAGTCTGGGCCTCAAGAATGGCGTAC 124510
Query 173167 CAAAGTTCTTGGGCTTTTACGGTAGTTCTCGCTCTTCCTTCTTTTTCGTATCTCTCATAG 173226
|| || | || || || | ||| | | | | ||||| | ||||| || | |||
Sbjct 124509 CAGAGCTTCTGAGCCTTGATGGTCTTGCGGCCACGGCCTTCCTGCTCGTACTTCGCGTAG 124450
Query 173227 AGGTCTTCGAAATCCTTCCCGTAAATTTCGTCAAGACCGGGAGCTTCCTTCGGACAAAAG 173286
|| | ||||| || | ||||| | || | |||||||| || || || || || |||
Sbjct 124449 AGAGCATCGAACTCATCGCCGTAGACATCAGCCAGACCGGGGGCCTCGTTGGGGCAGAAG 124390
Query 173287 AGACTCCAATTTCCATCGGTCTCGACCCTCTTCATGAAGAGGTCGGAAGTCCAAATCGCG 173346
|| |||| | || | || ||| || | |||||||||||| |||| ||||| | |||
Sbjct 124389 AGGGTCCAGTCACCGTTGGCCTCAACACGCTTCATGAAGAGATCGGGGGTCCACAAAGCG 124330
Query 173347 TAGAA 173351
|||||
Sbjct 124329 TAGAA 124325
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1181805718489316
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |