Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20nordicum_20[genbank_20GCA_5F001278595.1_202015-09-03] 996 sequences; 30,844,022 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq601 96.9 8e-15 seq46 86.0 1e-11 >seq601 Length=120753 Score = 96.9 bits (106), Expect = 8e-15 Identities = 145/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || |||||||| || || || || || | ||||| || || ||||| |||| Sbjct 55802 AAGACGCTCACTGGCAAGACTATTACACTTGAAGTCGAGTCATCCGACACTATCGATAAT 55743 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| ||||| || || || || || ||| || ||| || | ||||||||| Sbjct 55742 GTCAAGAGCAAGATCCAGGACAAGGAGGGTATTCCTCCTGACCAGCAGCGCCTTATCTTC 55683 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || || |||||| |||| || ||| | ||| | | || |||||| ||||||| ||||| Sbjct 55682 GCTGGTAAGCAGCTGGAGGACGGACGTACTCTTTCGGACTACAACATCCAGAAGGAGTCC 55623 Query 206365 ACTCTTCACCTTGTTTTGAGACTTCG 206390 ||||| ||||| || ||| | ||||| Sbjct 55622 ACTCTCCACCTGGTGTTGCGTCTTCG 55597 Score = 84.2 bits (92), Expect = 5e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 204752 CGAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTC 204811 ||||| | ||| || ||||| ||||| ||||| ||||||| || ||||| | | ||| Sbjct 55597 CGAAGACGCAACACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTA 55656 Query 204812 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTG 204855 | ||| || ||||||||||| || ||||||||||| || || || Sbjct 55657 CGTCCGTCCTCCAGCTGCTTACCAGCGAAGATAAGGCGCTGCTG 55700 >seq46 Length=203589 Score = 86.0 bits (94), Expect = 1e-11 Identities = 166/245 (68%), Gaps = 0/245 (0%) Strand=Plus/Minus Query 173107 GCGTCCTTGTAGACGATGAAGGGCATACCAACCTCCGCTTGAGCCACCAAAATGTGGTGC 173166 || |||||||||| || || || ||||| ||| | || ||| | | |||| || | Sbjct 124569 GCATCCTTGTAGAGCATAAATGGGTTACCAGTCTCAGTCTGGGCCTCAAGAATGGCGTAC 124510 Query 173167 CAAAGTTCTTGGGCTTTTACGGTAGTTCTCGCTCTTCCTTCTTTTTCGTATCTCTCATAG 173226 || || | || || || | ||| | | | | ||||| | ||||| || | ||| Sbjct 124509 CAGAGCTTCTGAGCCTTGATGGTCTTGCGGCCACGGCCTTCCTGCTCGTACTTCGCGTAG 124450 Query 173227 AGGTCTTCGAAATCCTTCCCGTAAATTTCGTCAAGACCGGGAGCTTCCTTCGGACAAAAG 173286 || | ||||| || | ||||| | || | |||||||| || || || || || ||| Sbjct 124449 AGAGCATCGAACTCATCGCCGTAGACATCAGCCAGACCGGGGGCCTCGTTGGGGCAGAAG 124390 Query 173287 AGACTCCAATTTCCATCGGTCTCGACCCTCTTCATGAAGAGGTCGGAAGTCCAAATCGCG 173346 || |||| | || | || ||| || | |||||||||||| |||| ||||| | ||| Sbjct 124389 AGGGTCCAGTCACCGTTGGCCTCAACACGCTTCATGAAGAGATCGGGGGTCCACAAAGCG 124330 Query 173347 TAGAA 173351 ||||| Sbjct 124329 TAGAA 124325 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181805718489316